Gene SeD_A3344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3344 
Symbol 
ID6871406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3219413 
End bp3220432 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content58% 
IMG OID642786348 
ProductHTH-type transcriptional regulator AscG 
Protein accessionYP_002216987 
Protein GI198243955 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.718161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.0271899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACAA TGCTGGATGT TTCCCGCCAT GCGGGCGTAT CAAAGGCCAC CGTCTCACGA 
GTGCTGAATG GGACGGGGCA GGTAAAAGAA AGCACGCGCC AGAAAGTGTT TACGGCGATG 
CAGGCTCTGG GCTATCGCCC CAACCTGCTG GCACGCTCGC TGGCGAATCG CACCAGCAAC 
AGCATCGGTC TGGTCGTCTC TACGTTTGAC GGCTTCTATT TCGGCAGTTT GTTGCGCCGG 
GCGTCGCGCC AGGCGGAGTT TCATAACAAG CAGTTGATCG TCACCGATGG TCACGATACG 
CCGGAACGAG AGCAGAAAGC CGTACAAATG TTGGCCGACA GACAGTGCGA CGCTATTATT 
CTTTACACTC GCTATATGGA TGAGCCGGCG ATTTTGTCGT TGATTGACGC CACGGAAATG 
CCGCTTGTGA TTATTAATCG CAACGTCACT CAGGCCCGCG ATCGCGCTAT TTTCTTCGAG 
CAGGAGACGG CGGCATTCCA GGCGGTGGAA TACCTGATTA CGCAGGGCCA TCGCGATATC 
GCCTGTATTA CGCTGCCTGT TCATACTCCC ACTGGCACAT CACGCGTAGC GGGTTATCGC 
AAGGCGCTGG AAAAGTATGG TATTCCCTGG CAACCGGCAA AAGTGAAATA CGGCGATTAC 
ACGCTGACGC GCGGCTATGA CGCCTGCCGG GAATTACTGG AGGAAGGCGT CACGTTTAGC 
GCGCTATTCG CCTGTAATGA TGACACGGCG CTGGGCGCGG CAAAAGCGCT GCGCCAGGCC 
GGATTACGCA TCCCGCAGGA TGTGTCGCTG TTTGGTTTTG ACGATGCGCC GGGCGCAACC 
TGGCTTGAAC CGGGGCTTTC AACAGTCTAT TTACCCATCG AGGATATGAT AGCCACCGCG 
ATCGATCAGG CCGTTCGCCT GGCGAACAGC GAGCCGGTCG CCCCGATCCC GCCCTTTACC 
GGCACGCTGA TTCTGCGCGA GTCCGTCGCC GCAGGCCCGT TTTTTCAACG TCCGGCCTAA
 
Protein sequence
MATMLDVSRH AGVSKATVSR VLNGTGQVKE STRQKVFTAM QALGYRPNLL ARSLANRTSN 
SIGLVVSTFD GFYFGSLLRR ASRQAEFHNK QLIVTDGHDT PEREQKAVQM LADRQCDAII 
LYTRYMDEPA ILSLIDATEM PLVIINRNVT QARDRAIFFE QETAAFQAVE YLITQGHRDI 
ACITLPVHTP TGTSRVAGYR KALEKYGIPW QPAKVKYGDY TLTRGYDACR ELLEEGVTFS 
ALFACNDDTA LGAAKALRQA GLRIPQDVSL FGFDDAPGAT WLEPGLSTVY LPIEDMIATA 
IDQAVRLANS EPVAPIPPFT GTLILRESVA AGPFFQRPA