| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3320 |
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| Symbol | recB |
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| ID | 6872914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3193855 |
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| End bp | 3197400 |
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| Gene Length | 3546 bp |
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| Protein Length | 1181 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642786327 |
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| Product | exonuclease V subunit beta |
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| Protein accession | YP_002216966 |
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| Protein GI | 198242178 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 0.602721 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATG TCGCCGAGAC TCTTGATCCT CTGCGCTTGC CCCTTACAGG CGAGCGTTTG
ATTGAAGCAT CAGCGGGCAC AGGCAAAACG TTTACTATCG CGGCGCTGTA TCTGCGGCTA
CTGCTCGGTT TAGGCGGCAG CACCGCATTT CCCCGTCCGT TGACCGTTGA AGAACTGCTG
GTGGTAACCT TTACGGAGGC CGCCACTGAA GAGCTGCGTG GGCGCATCCG CAGTAATATC
CATGAGTTGC GCATCGCCTG TCTGCGGGAA AGCACGGATA ATCCGCTGTA TGCCCGCTTG
CTGGAAGAAA TTAGCGACAA AAAGCAGGCC GCGCAGTGGT TATTACTGGC AGAACGACAA
ATGGACGAGG CCGCGGTCTT TACCATCCAC GGTTTTTGCC AGCGTATGCT CAGCCTGAAC
GCTTTCGAAT CCGGTATGTT GTTTGAGCAA CAGCTTATTG AAGACGAATC TTTGTTGCGT
TATCAGGCCT GCGCCGATTT CTGGCGGCGT CATTGCTATC CGCTGCCGCG CGACATCGCG
CAGGTGGTGT TTGACGTGTG GAAGGGACCG AAGGCGCTCT TAAAGGATAT CGATCGTTAT
CTGCAGGGCG AAGCGCCGGT CATTAAAGCG CCGCCATCGC AGGAGGAGAC GCTGGCATCG
CGTCATGAAC AGATCCTGGC GCGCATCAAC CAGGTGAAGC AGCAGTGGTG TGAGGCGGTT
AGCGAGCTGG ACGCGCTGAT CGAATCATCC GGCATCGATC GCAGAAAGTT CAACCGCGGC
AATCAGGCGA AATGGATCGA AAAGATCACC GCGTGGGCGC AAGAAGAGAC GAAAAACTAT
CAATTACCCG AGGCGTTGGG AAAATTTTCA CAGCGTTTTT TAGCTGAGCG CACCAAAGCT
GGCGGCGTGA CGCCCCAGCA CCCATTGTTT GTCGCCATTG ATAACCTGTT GGGCGAACCG
CTATCGATTA AAGATCTGGT TCTTACCCGA GCGCTATCAG AGATCCGTGA AACGGTGGCT
CAGGAAAAAC GCCGGCGCGG CGAGCTGGGG TTTGACGATA TGCTCAGCCG TTTAGATACC
GCGCTGCGTA GTGAAAGCGG CGAGGCGCTG GCTGCGGCGA TTCGTACCCG TTTTCCGGTG
GCGATGATCG ATGAATTTCA GGATACCGAC CCACAACAGT ACCGTATTTT TCGCCGTATC
TGGCGACATC AACCCGATAC GGCGCTATTG CTGATTGGCG ATCCTAAACA GGCGATTTAT
GCGTTTCGTG GCGCGGATAT CTTCACCTAC ATGAAGGCTC GCAGCGAAGT GAGCGCGCAC
TATACGCTTG ACACTAACTG GCGCTCCGCG CCGGGGATGG TGAATAGCGT TAACAAGCTG
TTCAGTCAGA TGAACGACGC CTTTATGTTC CGCGATATTC CCTTCAGTCC GGTAAAGTTT
GCGCCCAGAA ACCAGTCGCT GCAATTTAAA GTGAATGACG CGCCTCAACC GGCGATGACC
CTGTGGCTAA TGGAGGGGGA AAGCTGCGGT TCGGGCGATT ATCAAAGTTA TATGGCGCAG
GTGTGCGCCA CGCAAATTCG CGACTGGCTG CGTGCCGGGC AAACGGGCGA CGCGCTGCTG
ACGAACGGCG ATTCGTCGCG GCCCGTTCGT GCCTCGGATA TCAGCGTGTT GGTGCGCAGC
AGGCGGGAAG CCGCGCTGAT ACGGGATGCG CTGACCTTAC TGGCGATCCC CTCCGTCTAT
CTTTCTAACC GCGACAGCGT ATTCGAAACG CTCGAAGCGC AGGAGATGCT GTGGGTGTTG
CAGGCGGTGA TGGCGCCCGA ACGTGAGAAT ACGCTGCGTA GCGCTTTGGC GACATCAATG
ATGGGCCTTA CCGCGCTGGA TATCGAAACG CTTAACAATG ATGAAAATGC GTGGGATGCG
GTTGTCGAAG AGTTTGATGG CTACCGACAG ATTTGGCATA AACGCGGCGT GATGCCTATG
CTGCGCGCGC TAATGTCGGC GCGCAATATT GCTGAAAACC TGCTGGCGAC GGCGGGAGGC
GAACGTCGGC TGACGGATAT TTTGCATATT AGCGAGCTGT TACAGGAAGC CGGTTCGCAG
CTGGAAAGCG AACATGCGCT GGTGCGTTGG CTGGCGCAGC ATATCCTTGA ACCCGATAGC
AATGCTTCCA GCCAGCAACT ACGTCTGGAA AGCGATAAGC ATCTGGTGCA AATCGTCACC
ATTCATAAAT CGAAAGGTCT GGAATACCCG CTGGTCTGGT TACCTTTTAT CACCCATTTC
CGCGTGCAGG ACCAGGCTTT TTATCACGAC AGGCACTCCT ACGAGGCGGT GCTGGACCTT
AGTCACGCCG AAGAGAGCAT AGCACTGGCG GAAGCCGAAC GCCTGGCGGA AGACCTGCGC
CTACTTTATG TCGCGCTGAC CCGTGCAGTG TGGCATTGCA GCCTCGGCGT CGCGCCGCTG
GTGCGGCGTC GTAGCGATAA GAAAGGAGAG ACGGATGTGC ACCAAAGCGC GCTTGGGCGA
CTCCTGCAAA AAGGCGAACC GATGGATGCC GCAGGCCTTC GCGCCTGTAT TGAGGCGCTA
TGCGACGAGG ATATCGTGTG TCGAACGCCA GGCAATACGG ATAACGACCG CTGGCAAATT
GCCGCTGCAT CGCACGCGGA ACTCAGTGCC AGAACGCTGC AACGCCTGCT TTATGATAGC
TGGCGCGTCA CCAGTTATTC CGGTTTGCAG CAGCGGGGAC ATAGCGTGGC GCAAGATCTT
ATTCCTCGTC TCGACATTGA CGCCGCAGGC GTTGGCGAAG CGGCGGAAGC GCCGGCAATG
ACGCCGCATC ACTTTCCTCG CGGGGCATCG CCGGGAACAT TTTTGCACAA CCTGTTTGAA
GAGCTTGATT TTACTCAACC GATAAACCCC CAATGGGTAC AGGAAAAACT GGAGCTGAGT
GGTTTTGAGA CGCGATGGGA GCCCGTACTT ACCCGCTGGC TGGACACCGT GTTGCACGTT
CCCCTTAACG AGACGGGCGT TAGTCTGAGC GTGCTGACCG AGCGTGAAAA ACAGGTCGAA
ATGGAGTTTT ATCTGCCGAT TGCCCAGCCG CTTACCGCCG GAGAGCTGGA TGCGTTGATT
CGTCGATACG ACCCGCTTTC AGCAGGTTGC CCTGCGCTGG ATTTCATGCA GGTTCGCGGC
ATGTTAAAGG GCTTTATCGA CCTGGTTTTT CGTTATGAGG GGCGCTATTA CCTGCTCGAC
TATAAATCTA ACTGGCTGGG CGAGGATAGC GCCGCTTATA CCCAGGCGGC GATGGCTACG
GCGATGCAGG CGCATCGCTA TGATTTGCAG TACCAGCTTT ATACGCTGGC ATTGCATCGT
TACCTTCGTC ATCGCATGGC GAATTACGAC TATGAACGCC ATTTCGGCGG CGTCATCTAT
CTCTTTTTAC GCGGGGTGGA TAGCGAACGT CCGCAGCAGG GTATTTTTAC CACTCGCCCT
GCGGCGGCGT TAATTAACCA ACTGGATGAT ATGTTTGCAG GTGAAATGAG TGAGGAGGCG
CAATGA
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| Protein sequence | MNDVAETLDP LRLPLTGERL IEASAGTGKT FTIAALYLRL LLGLGGSTAF PRPLTVEELL
VVTFTEAATE ELRGRIRSNI HELRIACLRE STDNPLYARL LEEISDKKQA AQWLLLAERQ
MDEAAVFTIH GFCQRMLSLN AFESGMLFEQ QLIEDESLLR YQACADFWRR HCYPLPRDIA
QVVFDVWKGP KALLKDIDRY LQGEAPVIKA PPSQEETLAS RHEQILARIN QVKQQWCEAV
SELDALIESS GIDRRKFNRG NQAKWIEKIT AWAQEETKNY QLPEALGKFS QRFLAERTKA
GGVTPQHPLF VAIDNLLGEP LSIKDLVLTR ALSEIRETVA QEKRRRGELG FDDMLSRLDT
ALRSESGEAL AAAIRTRFPV AMIDEFQDTD PQQYRIFRRI WRHQPDTALL LIGDPKQAIY
AFRGADIFTY MKARSEVSAH YTLDTNWRSA PGMVNSVNKL FSQMNDAFMF RDIPFSPVKF
APRNQSLQFK VNDAPQPAMT LWLMEGESCG SGDYQSYMAQ VCATQIRDWL RAGQTGDALL
TNGDSSRPVR ASDISVLVRS RREAALIRDA LTLLAIPSVY LSNRDSVFET LEAQEMLWVL
QAVMAPEREN TLRSALATSM MGLTALDIET LNNDENAWDA VVEEFDGYRQ IWHKRGVMPM
LRALMSARNI AENLLATAGG ERRLTDILHI SELLQEAGSQ LESEHALVRW LAQHILEPDS
NASSQQLRLE SDKHLVQIVT IHKSKGLEYP LVWLPFITHF RVQDQAFYHD RHSYEAVLDL
SHAEESIALA EAERLAEDLR LLYVALTRAV WHCSLGVAPL VRRRSDKKGE TDVHQSALGR
LLQKGEPMDA AGLRACIEAL CDEDIVCRTP GNTDNDRWQI AAASHAELSA RTLQRLLYDS
WRVTSYSGLQ QRGHSVAQDL IPRLDIDAAG VGEAAEAPAM TPHHFPRGAS PGTFLHNLFE
ELDFTQPINP QWVQEKLELS GFETRWEPVL TRWLDTVLHV PLNETGVSLS VLTEREKQVE
MEFYLPIAQP LTAGELDALI RRYDPLSAGC PALDFMQVRG MLKGFIDLVF RYEGRYYLLD
YKSNWLGEDS AAYTQAAMAT AMQAHRYDLQ YQLYTLALHR YLRHRMANYD YERHFGGVIY
LFLRGVDSER PQQGIFTTRP AAALINQLDD MFAGEMSEEA Q
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