Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3304 |
Symbol | |
ID | 6871830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3179743 |
End bp | 3180453 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642786314 |
Product | DNA-binding transcriptional activator FucR |
Protein accession | YP_002216955 |
Protein GI | 198245189 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGCGG CACGCCAACA AGCGATAGTC GATCTGCTGA TCAATCATAA AAGTCTGACC ACCGAAGCGC TGGCCACCCG GCTTAACGTC AGTAAAGAGA CCATCCGCCG CGATCTCAGT GAACTACAGA CGCAGGGAAA AGTGCTGCGT AATCACGGAC GAGCTAAATA TATTCATCGT GAAAATCAGG ACAGCGGCGA TCCATTCCAT ATCCGCCTGA AAAGCCATTA TGCGCACAAA GCCGATATTG CCCGTGAAGC GTTAGCGTGG ATAGAAGAAG GAATGACGAT TGCGCTGGAT GCCAGTTCAA CCTGCTGGTA TCTGGCCCGC CAGTTGCCGG ATATTCCCAT TCAGGTTTTT ACCAATAGCC ATCCTATCTG TCAGGAGCTG GGAAAACGCG AACGCATTAC GCTGATAAGT TCCGGCGGCC AGCTTGAACG TAAATATGGC TGTTATGTTA ATCCGTCGCT TATCTCACAG CTAAAATCGC TTGATATCGA TCTGTTCATC TTTTCCTGTG AGGGGATCGA CGGCGGCGGC GATCTGTGGG ACTCCAATGC GATCAACGCC GATTTTAAAT CTATCCTGCT CAGGCGTGCC TCGCAGGCTT TATTATTGAT TGATAAAAGT AAATTTAATC GTTCAGGAGA GGCGCGCATC GGCCATCTGG ATGACGTGAC GCATATTGTT TCAGATGCGC CGCAGTCATA G
|
Protein sequence | MKAARQQAIV DLLINHKSLT TEALATRLNV SKETIRRDLS ELQTQGKVLR NHGRAKYIHR ENQDSGDPFH IRLKSHYAHK ADIAREALAW IEEGMTIALD ASSTCWYLAR QLPDIPIQVF TNSHPICQEL GKRERITLIS SGGQLERKYG CYVNPSLISQ LKSLDIDLFI FSCEGIDGGG DLWDSNAINA DFKSILLRRA SQALLLIDKS KFNRSGEARI GHLDDVTHIV SDAPQS
|
| |