Gene SeD_A3173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3173 
Symbol 
ID6875378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3052493 
End bp3053353 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content55% 
IMG OID642786194 
Productchelated iron transport system membrane protein YfeC 
Protein accessionYP_002216835 
Protein GI198242588 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.304498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.876834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGC TTGTTGAGCC GTTTGGCTAC CAGTATATGC TCAACGCGAT GTGGGTCTCC 
GCAATGGTGG GCGGTCTGTG CGCGTTTCTC TCCTGCTATT TGATGCTCAA AGGCTGGTCG
CTCATTGGCG ATGCGCTATC TCACTCTATT GTGCCTGGCG TCGCTGGCGC CTGGATGTTA
GGGCTGCCCT TCTCGCTCGG CGCGTTTCTT TCCGGCGGAC TGGCGGCAGG CAGTATGCTC
TTTCTTAACC AACGCTCACG CCTGAAAGAA GACGCGATTA TCGGGCTTAT CTTCTCCTCT
TTTTTTGGCG TCGGCCTTTT TATGGTGTCG CTCAATCCGA TGTCGGTGAA TATCCAGACG
ATTATTCTCG GTAACGTGCT GGCGATCGCG CCAGCGGATA TTGCGCAACT GGCGATTATC
GGCGCAGTCT CGCTGACGAT TCTGCTGTTA AAGTGGAAAG ATCTGATGGT CGTCTTTTTC
GATGAGACCC ATGCGCGTTC TATCGGGCTT AATCCGGGTC GACTAAAGCT GTTGTTTTTC
ACTCTATTGT CCGTCTCTAC CGTGGCGGCC CTGCAAACCG TTGGGGCGTT CCTGGTGATC
TGTCTCGTCG TCACGCCGGG CGCGACGGCC TGGTTACTCA CCGACCGTTT TCCACGTCTG
CTCATGATTG CCGTCGTGAT TGGTAGCCTG ACCAGTTTTC TGGGCGCATG GCTTAGCTAC
TGGCTGGATG GCGCCACTGG CGGAATTATT GTCGTCATGC AAACCTTACT GTTCATCACA
GCCTTTATTT TCGCCCCGAA ACACGGTCTG TTAGCCAACC GTCGACGCGC CCGCCTGCAG
AAGGAGCCGA CATGTTCTTA A
 
Protein sequence
MNWLVEPFGY QYMLNAMWVS AMVGGLCAFL SCYLMLKGWS LIGDALSHSI VPGVAGAWML 
GLPFSLGAFL SGGLAAGSML FLNQRSRLKE DAIIGLIFSS FFGVGLFMVS LNPMSVNIQT
IILGNVLAIA PADIAQLAII GAVSLTILLL KWKDLMVVFF DETHARSIGL NPGRLKLLFF
TLLSVSTVAA LQTVGAFLVI CLVVTPGATA WLLTDRFPRL LMIAVVIGSL TSFLGAWLSY
WLDGATGGII VVMQTLLFIT AFIFAPKHGL LANRRRARLQ KEPTCS