Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3147 |
Symbol | gutQ |
ID | 6874751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3026793 |
End bp | 3027758 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642786168 |
Product | D-arabinose 5-phosphate isomerase |
Protein accession | YP_002216809 |
Protein GI | 198244302 |
COG category | [M] Cell wall/membrane/envelope biogenesis [T] Signal transduction mechanisms |
COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00650637 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.0214142 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATG CACTACTAAA CGCGGGCCGT CAGACCTTAA TGCTGGAGCT ACAAGAAGCC AGCCGTCTGC CGGAGCGTCT GGGCGATGAT TTTGTCCGCG CCGCCAATAT CATTATTCAC TGTGAAGGCA AAGTGATCGT TTCCGGTATT GGTAAATCAG GTCATATTGG TAAAAAAATC GCCGCGACGC TTGCCAGTAC CGGTACTCCC GCTTTTTTTG TTCATCCGGC GGAAGCACTG CATGGCGATC TGGGGATGAT TGAAAGCCGC GATGTGATGT TATTTATCTC CTATTCCGGC GGCGCAAAAG AACTCGACCT CATCATCCCG CGTCTGGAAG ATAAATCCGT CGCGCTGCTG GCGATGACCG GTAAACCTCT CTCTCCGCTG GGGCGAGCGG CAAAAGCCGT TCTGGATATT TCCGTCGAGC GTGAAGCCTG TCCGATGCAT CTGGCGCCGA CATCCAGTAC CGTCAATACG CTGATGATGG GCGATGCGCT GGCGATGGCG GTCATGCAGG CGCGCGGTTT TAACGAAGAA GATTTCGCCC GTTCGCATCC GGCTGGCGCA CTGGGCGCGC GTTTGCTCAA TAATGTGCAT CACCTGATGC GCCAGGGCGA TGCAATACCG CAGGTGATGC TCGCCACCAG CGTGATGGAT GCCATGCTGG AACTTAGCCG TACCGGGCTG GGGCTGGTGG CGGTTTGCGA TGAGCAACAT GTTGTGAAAG GCGTCTTTAC CGACGGCGAC CTGCGCCGCT GGCTGGTGGG CGGCGGCGCG CTCACCACGC CGGTAAGCGA AGCCATGACG CCCAACGGTA TTACGCTCCA GGCGCAAAGC CGCGCCATTG ACGCCAAAGA GCTCCTGATG AAGCGCAAAA TTACCGCCGC GCCAGTGGTC GATGAAAACG GCAAACTCAC CGGCGCCATT AACCTACAGG ATTTCTACCA GGCGGGGATT ATCTAA
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Protein sequence | MSDALLNAGR QTLMLELQEA SRLPERLGDD FVRAANIIIH CEGKVIVSGI GKSGHIGKKI AATLASTGTP AFFVHPAEAL HGDLGMIESR DVMLFISYSG GAKELDLIIP RLEDKSVALL AMTGKPLSPL GRAAKAVLDI SVEREACPMH LAPTSSTVNT LMMGDALAMA VMQARGFNEE DFARSHPAGA LGARLLNNVH HLMRQGDAIP QVMLATSVMD AMLELSRTGL GLVAVCDEQH VVKGVFTDGD LRRWLVGGGA LTTPVSEAMT PNGITLQAQS RAIDAKELLM KRKITAAPVV DENGKLTGAI NLQDFYQAGI I
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