Gene SeD_A3138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3138 
SymbolrecA 
ID6871393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3019242 
End bp3020303 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content54% 
IMG OID642786159 
Productrecombinase A 
Protein accessionYP_002216800 
Protein GI198241828 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.000383703 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCTATCG ACGAAAACAA ACAGAAAGCG TTGGCGGCAG CACTGGGCCA AATTGAAAAG 
CAATTTGGTA AAGGCTCCAT CATGCGTCTG GGTGAAGACC GTTCTATGGA TGTGGAAACT
ATCTCCACCG GTTCGCTTTC ACTGGACATC GCACTCGGTG CGGGCGGTCT GCCGATGGGG
CGTATCGTCG AAATTTACGG GCCGGAATCT TCCGGTAAAA CGACCCTGAC GCTGCAGGTG
ATTGCCGCTG CGCAGCGTGA AGGTAAAACC TGTGCGTTTA TCGATGCGGA ACACGCGCTT
GACCCTGTTT ACGCACGCAA GCTGGGCGTC GATATCGATA ACCTGCTCTG CTCTCAGCCG
GATACCGGCG AGCAGGCGCT GGAAATCTGT GACGCGCTGG CGCGTTCAGG CGCGGTGGAC
GTCATTGTGG TCGACTCCGT AGCGGCGCTA ACGCCGAAAG CGGAAATCGA AGGTGAAATT
GGCGACTCTC ACATGGGCCT CGCGGCGCGT ATGATGAGCC AGGCGATGCG TAAGCTGGCG
GGGAACCTGA AACAGTCCAA CACGCTGTTG ATTTTCATCA ACCAGATCCG TATGAAGATT
GGCGTGATGT TCGGTAACCC GGAAACCACC ACCGGCGGTA ACGCGCTGAA ATTCTACGCC
TCTGTTCGTC TTGATATCCG TCGTATTGGC GCGGTGAAAG AGGGCGATAA TGTCGTAGGT
AGCGAAACGC GTGTGAAAGT GGTGAAAAAC AAAATCGCCG CGCCGTTTAA GCAGGCCGAG
TTCCAGATCC TCTACGGTGA AGGCATCAAC TTCTATGGCG AACTGGTTGA CCTGGGCGTG
AAAGAGAAGC TGATCGAGAA AGCGGGCGCA TGGTACAGCT ACAACGGCGA GAAGATTGGC
CAGGGTAAAG CGAACGCGAC TACCTGGCTG AAAGAGAACC CGGCGACAGC GAAAGAGATC
GAGAAAAGGG TTCGTGAATT ACTGTTGAGT AATCAGAATG CCACGCCCGA TTTCGCCGTT
GACGATAGCG AAGGCGTTGC AGAAACCAAC GAAGATTTTT AA
 
Protein sequence
MAIDENKQKA LAAALGQIEK QFGKGSIMRL GEDRSMDVET ISTGSLSLDI ALGAGGLPMG 
RIVEIYGPES SGKTTLTLQV IAAAQREGKT CAFIDAEHAL DPVYARKLGV DIDNLLCSQP
DTGEQALEIC DALARSGAVD VIVVDSVAAL TPKAEIEGEI GDSHMGLAAR MMSQAMRKLA
GNLKQSNTLL IFINQIRMKI GVMFGNPETT TGGNALKFYA SVRLDIRRIG AVKEGDNVVG
SETRVKVVKN KIAAPFKQAE FQILYGEGIN FYGELVDLGV KEKLIEKAGA WYSYNGEKIG
QGKANATTWL KENPATAKEI EKRVRELLLS NQNATPDFAV DDSEGVAETN EDF