Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2968 |
Symbol | nadB |
ID | 6873480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 2859478 |
End bp | 2861100 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642786006 |
Product | L-aspartate oxidase |
Protein accession | YP_002216656 |
Protein GI | 198242474 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0029] Aspartate oxidase |
TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACAA CTCCTGAACT GTCCTGTGAT GTGTTAATTA TCGGCAGCGG CGCGGCCGGA CTCTCGCTGG CGCTGCGTCT GGCTGAAAAA CATAAGGTTA TCGTCCTGAG TAAAGGGCCG GTGAGCGAGG GCTCCACGTT TTATGCGCAG GGCGGTATTG CCGCCGTGTT TGATGAAACC GACAGTATTG CGTCGCATGT CGAAGATACG CTGATTGCCG GCGCCGGAAT TTGTGATCGC CACGCGGTGG AGTTTGTCGC CAGCAACGCC CGTACCTGCG TGCAGTGGCT TATCGATCAG GGCGTGCTGT TTGATACGCA TGTCCAGCCA AACGGCAAGG AGAGCTATCA TCTCACGCGT GAAGGCGGCC ATAGTCATCG CCGTATCCTT CATGCCGCCG ACGCTACCGG AAAGGAAGTC GAAACCACAT TGGTCAGTCG GGCGCAAAAT CATCCTAATA TTCAGGTGCT GGAGCGCAGC AACGCCGTTG ATTTAATTAT CTCCGATAAA ATGGGTCTGC CGGGGCCTCG CCGGGTCGTC GGCGCCTGGA TCTGGAATCG CAATAAAGAA TGGGTTGAAA CCTGTCATGC GAAGTCGGTG GTGCTGGCGA CCGGCGGCGC CTCAAAGGTT TATCAATATA CCACTAACCC GGATATTTCC TCCGGCGACG GTATCGCGAT GGCCTGGCGC GCAGGCTGTC GGGTCGCTAA TCTGGAATTT AACCAGTTTC ATCCCACCGC CCTTTATCAC CCGCAGGCGC GTAATTTTCT CCTTACCGAA GCGCTGCGCG GCGAAGGCGC ATACCTTAAA CGTCCGGACG GTTCACGGTT TATGCCGGAC GTTGACGAAC GCGGGGAACT GGCGCCGCGC GATATTGTCG CCCGCGCTAT TGATCATGAG ATGAAACGAC TCGGCGCAGA CTGTATGTTT CTCGATATCA GCCACAAGCC TGACGATTTT ATCCGCCAGC ACTTCCCGAT GATCTATGCG AAACTGCTCG ATTTGGGGAT GGATTTAACC AAAGAACCGA TTCCCGTTGT TCCTGCCGCG CACTATACCT GCGGCGGCGT GGTCGTCGAT GATTATGGTC GTACCGATGT AGACGGCTTA TATGCCATTG GCGAAGTCAG TTACACCGGC CTGCACGGCG CTAACCGTAT GGCGTCCAAC TCGTTGCTGG AATGCTTAGT GTACGGCTGG TCCGCGGCAA TAGATATCGA CAGGCGAATG CCTTCTGTCC ACAGCGTTGA CGTCCTTCCC GCCTGGGATG AAAGCCGCGT GGAGAACGCC GATGAGCGGG TGGTGATTCA GCATAACTGG CATGAACTGC GCCTGCTGAT GTGGGACTAT GTGGGCATTG TGCGCACGAC GAAACGGCTG GAGCGCGCCC TACGGCGTAT TACCATGTTG CAACAAGAGA TTGACGAATA TTACGCCAAC TTTCGCGTCT CGAATAATTT ACTGGAGCTG CGCAATCTGG TGCAAGTGGC CGAACTGATT GTGCGTTGTG CGATGATGCG TAAAGAGAGT CGGGGGCTGC ACTTTACGCT GGATTATCCG CAACAACTGG CTGAATCAGG CCCATCGCTC CTTTCGCCGT TAACGCCTCA CATAAATAGA TAA
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Protein sequence | MMTTPELSCD VLIIGSGAAG LSLALRLAEK HKVIVLSKGP VSEGSTFYAQ GGIAAVFDET DSIASHVEDT LIAGAGICDR HAVEFVASNA RTCVQWLIDQ GVLFDTHVQP NGKESYHLTR EGGHSHRRIL HAADATGKEV ETTLVSRAQN HPNIQVLERS NAVDLIISDK MGLPGPRRVV GAWIWNRNKE WVETCHAKSV VLATGGASKV YQYTTNPDIS SGDGIAMAWR AGCRVANLEF NQFHPTALYH PQARNFLLTE ALRGEGAYLK RPDGSRFMPD VDERGELAPR DIVARAIDHE MKRLGADCMF LDISHKPDDF IRQHFPMIYA KLLDLGMDLT KEPIPVVPAA HYTCGGVVVD DYGRTDVDGL YAIGEVSYTG LHGANRMASN SLLECLVYGW SAAIDIDRRM PSVHSVDVLP AWDESRVENA DERVVIQHNW HELRLLMWDY VGIVRTTKRL ERALRRITML QQEIDEYYAN FRVSNNLLEL RNLVQVAELI VRCAMMRKES RGLHFTLDYP QQLAESGPSL LSPLTPHINR
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