Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2959 |
Symbol | rnc |
ID | 6871252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2852368 |
End bp | 2853105 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642785998 |
Product | ribonuclease III |
Protein accession | YP_002216648 |
Protein GI | 198245284 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0879861 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 94 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTATCAGG TCTGTTTCGT GTGCTGGATT GTTGACGCAT TCATTTATTG GTATCGCATG AACCCCATCG TAATTAATCG GCTTCAACGG AAGCTGGGCT ACACTTTTAA TCATCAGGAG CTGTTGCAGC AGGCATTAAC TCACCGCAGC GCCAGCAGTA AACATAACGA ACGCCTGGAA TTTTTAGGCG ATTCAATCCT GAGCTTCGTT ATCGCTAACG CGCTTTATCA CCGTTTTCCA CGGGTGGATG AGGGAGATAT GAGCCGTATG CGCGCCACGT TGGTACGTGG TAATACGCTG GCGGAATTAG CCCGTGAATT TGATTTAGGC GAGTGCCTGC GTTTAGGGCC GGGCGAATTA AAAAGCGGCG GATTCCGTCG AGAGTCCATT CTGGCGGACA CCGTGGAAGC GTTAATCGGC GGAGTATTTC TCGATAGCAA TATCCAGACC GTCGAGCAGT TAATCCTTAA CTGGTATAAA ACCCGTCTGG ATGAGATAAG CCCGGGCGAT AAACAAAAAG ATCCTAAAAC GCGCTTGCAG GAGTATTTGC AGGGTCGCCA TCTGCCGCTG CCATCTTACC TGGTTGTGCA GGTACGCGGC GAGGCGCACG ATCAGGAATT TACTATCCAC TGCCAGGTCA GCGGCCTGAG CGAACCGGTG GTTGGCACGG GTTCCAGCCG TCGTAAGGCG GAGCAGGCTG CCGCCGAACA GGCGCTGAAA AAACTGGAGT TGGAATGA
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Protein sequence | MYQVCFVCWI VDAFIYWYRM NPIVINRLQR KLGYTFNHQE LLQQALTHRS ASSKHNERLE FLGDSILSFV IANALYHRFP RVDEGDMSRM RATLVRGNTL AELAREFDLG ECLRLGPGEL KSGGFRRESI LADTVEALIG GVFLDSNIQT VEQLILNWYK TRLDEISPGD KQKDPKTRLQ EYLQGRHLPL PSYLVVQVRG EAHDQEFTIH CQVSGLSEPV VGTGSSRRKA EQAAAEQALK KLELE
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