Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2956 |
Symbol | pdxJ |
ID | 6870968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2849983 |
End bp | 2850714 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642785995 |
Product | pyridoxine 5'-phosphate synthase |
Protein accession | YP_002216645 |
Protein GI | 198243503 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.586125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 98 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAT TACTGTTAGG CGTCAATATT GACCACATTG CCACGTTACG TAATGCGCGC GGCACCGACT ATCCGGATCC GGTACAGGCG GCGTTTATTG CTGAACAGGC AGGCGCGGAC GGCATTACCG TACACCTGCG CGAAGATCGT CGCCACATTA CCGATCGCGA TGTGCGCATT CTGCGTCAGA CGCTGCATAC GCGTATGAAT CTGGAGATGG CGGTGACCGA AGAGATGCTG GCGATCGCCG TAGAAACCAG GCCGCATTTC TGTTGTCTGG TGCCGGAAAA ACGCCAGGAA GTCACCACCG AAGGCGGTCT GGATGTGGCC GGACAGCGCG ATAAAATGCG TGATGCCTGT GCGCGCCTGG CGGCGGCTGG CATCCAGGTT TCGCTCTTTA TCGATGCCGA TGAAACGCAA ATCAACGCGG CGGCGGAAGT CGGCGCGCCG TTTATCGAAA TCCATACCGG CTGCTACGCC AACGCAGAAA CCGATGCGGA ACAGGCAAAA GAGCTGGCGC GTATCGCCAG CGCCGCGACC CTGGCGGCCC GTCTGGGGCT AAAAGTAAAT GCGGGTCATG GTCTGACCTA CCATAACGTC AAAGCTATTG CCGCACTGCC GGAAATGCAC GAGCTCAATA TCGGTCATGC CATTATTGGT CGGGCGGTGA TGACGGGGCT GAAAGAGGCG GTGGCTGAAA TGAAACGTTT GATGCTGGAA GCGCGCGGCT AA
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Protein sequence | MAELLLGVNI DHIATLRNAR GTDYPDPVQA AFIAEQAGAD GITVHLREDR RHITDRDVRI LRQTLHTRMN LEMAVTEEML AIAVETRPHF CCLVPEKRQE VTTEGGLDVA GQRDKMRDAC ARLAAAGIQV SLFIDADETQ INAAAEVGAP FIEIHTGCYA NAETDAEQAK ELARIASAAT LAARLGLKVN AGHGLTYHNV KAIAALPEMH ELNIGHAIIG RAVMTGLKEA VAEMKRLMLE ARG
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