Gene SeD_A2919 details

Gene Information

• Locus tag: SeD_A2919
• Symbol: iscR
• ID: 6873179
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853
• Kingdom: Bacteria
• Replicon accession: NC_011205
• Strand: -
• Start bp: 2810538
• End bp: 2811032
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 642785960
• Product: DNA-binding transcriptional regulator IscR
• Protein accession: YP_002216610
• Protein GI: 198243196
• COG category: [K] Transcription
• COG ID: [COG1959] Predicted transcriptional regulator
• TIGRFAM ID: [TIGR00738] rrf2 family protein (putative transcriptional regulator); [TIGR02010] iron-sulfur cluster assembly transcription factor IscR

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0662374
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 86
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGACTGA CATCTAAAGG GCGTTATGCC GTGACCGCAA TGTTAGACGT TGCGCTCAAC 
TCCGAAGCGG GCCCGGTACC GTTGGCTGAT ATTTCTGAAC GTCAGGGGAT TTCCCTTTCT 
TATCTGGAAC AGCTATTTTC CCGTTTACGT AAAAACGGTC TGGTTTCCAG CGTACGCGGG 
CCGGGCGGCG GTTATCTGCT GGGTAAAGAT GCTGGCAGTA TCGCGGTCGG CGAAGTGATC 
AGCGCGGTTG ATGAATCCGT TGACGCGACC CGTTGCCAGG GCAAAGGCGG CTGCCAGGGC 
GGCGATAAAT GCCTGACCCA TGCGCTGTGG CGTGATTTAA GCGATCGCCT GACCGGTTTT 
CTCAACAATA TTACCTTAGG CGAGCTGGTG AATAACCAGG AAGTTCTGGA TGTGTCTGGT 
CGCCAGCACA CGCATGACGC GCCGCGCGCC AGTGGTCGTG CGCAGGACGC TATCGACGTT 
AAATTACGCG CTTAA 

 

Protein sequence

MRLTSKGRYA VTAMLDVALN SEAGPVPLAD ISERQGISLS YLEQLFSRLR KNGLVSSVRG 
PGGGYLLGKD AGSIAVGEVI SAVDESVDAT RCQGKGGCQG GDKCLTHALW RDLSDRLTGF 
LNNITLGELV NNQEVLDVSG RQHTHDAPRA SGRAQDAIDV KLRA