Gene SeD_A2884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2884 
Symbol 
ID6874878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2775270 
End bp2776229 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content53% 
IMG OID642785929 
Productputative outer membrane protein 
Protein accessionYP_002216579 
Protein GI198246076 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCAA CAGTAAAACG GCGGCTGACG AAGGTCGCTT TAGCATTAGT AGTTGCCGGG 
TATTGCGCCG CGCCAGCGGT GGCGGCAAAC GGTAATCTGA AATCGGGGCA GTGGCAGATT 
GTCTCTGAAC AGACGGGCAC CATTCAGGGT ACGGTGCCGT GGATTACCCG TGCGGCGGAT 
AAAACTGCGG ATACCGACAA AGATCACGTA ACGGTAACTA TCGATCGCGG CGATCGTAAA 
ATTGTGACCG AAGGCGATAA GCAGTTCCAC GTTGGCGATA AGGTCACGGT GAACTGGGCG 
ATTGGCGATA CGGAAGGCGA CCTGGACACC GACAACACGG CAACTAAAGC CACCGTGAAA 
TGGGTGAGCT TTAGCGATCA GAATGGCAGC GACCCCAAAG ATCTTGGTAC TGGTGACAGT 
TATGAAATCC AGGCCGCTGA TGCGGATCGT TATATCGGTA TCAAAATCAC GCCAACCACT 
ACCACCGGTG ACCCTGCCGT GGCAACCGAA CTGCTGTTGA AAGACCTGTC GACCGATGCG 
GGCGGTGGTT CGGATGATGA CGAAATTCCG GAAGGTCCGG TGGTGGATGA AAACGTCCAT 
GTGGTTATTC ATGAGAAAGA TTCGAATACC AACCTGTTGA AGAATTCAGG GACGACACTC 
AAAACGAATA CCACCTATCA GGTATTGCTG TGGAGCGATA AGAACGGCAA CGGTACCTAT 
GATGCCGGTG AAAACGTTAC CGACCAGTAT GACTACCGCT GGAAATTCGT CGGCACCAGT 
AAAATTGCAG GTACCGGTAC CGGCGGTATC GTCAACGAAA GCTGGAACGA TAAAGACCTT 
GTCATCCCTG TCACCAACGC CGAAGCGAAA ATGGCGTTCG AGGGAGCAGA CGGCGGCGTT 
ACCGTGGGTA GCGACGGTGT CCAGGGCTTT GGTCTGTCCA TCGACTACAA ACGCAAATAA
 
Protein sequence
MQATVKRRLT KVALALVVAG YCAAPAVAAN GNLKSGQWQI VSEQTGTIQG TVPWITRAAD 
KTADTDKDHV TVTIDRGDRK IVTEGDKQFH VGDKVTVNWA IGDTEGDLDT DNTATKATVK 
WVSFSDQNGS DPKDLGTGDS YEIQAADADR YIGIKITPTT TTGDPAVATE LLLKDLSTDA 
GGGSDDDEIP EGPVVDENVH VVIHEKDSNT NLLKNSGTTL KTNTTYQVLL WSDKNGNGTY 
DAGENVTDQY DYRWKFVGTS KIAGTGTGGI VNESWNDKDL VIPVTNAEAK MAFEGADGGV 
TVGSDGVQGF GLSIDYKRK