Gene SeD_A2703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2703 
SymbolhisQ 
ID6871518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2584785 
End bp2585471 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content55% 
IMG OID642785768 
Producthistidine ABC transporter permease HisQ 
Protein accessionYP_002216425 
Protein GI198243854 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4215] ABC-type arginine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTACG GGTTTTCAGG CGTAATTTTA CAGGGCGCGA TCGTCACGCT GGAACTGGCG 
CTCAGTTCCG TGGTGCTGGC CGTGCTTATC GGTCTTGTCG GCGCGGGGGC GAAGCTTTCG
CAAAACCGGG TAACGGGGCT TATTTTTGAA GGATACACCA CCCTGATTCG CGGGGTGCCG
GATCTGGTCT TAATGCTGCT GATATTTTAC GGATTGCAAA TCGCGCTTAA CGTGGTGACC
GATTCGCTGG GTATCGACCA GATAGATATT GATCCGATGG TGGCCGGTAT TATCACCCTT
GGTTTCATCT ACGGCGCCTA TTTTACCGAA ACCTTTCGCG GCGCGTTTAT GGCGGTGCCG
AAAGGCCATA TCGAGGCGGC GACGGCTTTT GGTTTTACCC ACGGGCAAAC CTTCCGGCGG
ATTATGTTCC CGGCGATGAT GCGTTACGCC CTGCCGGGGA TCGGCAATAA CTGGCAGGTG
ATACTCAAAG CGACGGCGCT GGTGTCGCTG CTGGGCCTGG AAGATGTCGT CAAAGCCACG
CAGCTTGCCG GTAAAAGCAC CTGGGAGCCT TTCTATTTTG CCGTGGTCTG TGGACTTATC
TACCTGGTAT TTACCACCGT TTCCAATGGT GTGCTGCTCT TACTTGAGCG TCGCTATTCC
GTGGGCGTGA AGAGGGCCGA TTTGTGA
 
Protein sequence
MLYGFSGVIL QGAIVTLELA LSSVVLAVLI GLVGAGAKLS QNRVTGLIFE GYTTLIRGVP 
DLVLMLLIFY GLQIALNVVT DSLGIDQIDI DPMVAGIITL GFIYGAYFTE TFRGAFMAVP
KGHIEAATAF GFTHGQTFRR IMFPAMMRYA LPGIGNNWQV ILKATALVSL LGLEDVVKAT
QLAGKSTWEP FYFAVVCGLI YLVFTTVSNG VLLLLERRYS VGVKRADL