Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2652 |
Symbol | |
ID | 6873225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2536023 |
End bp | 2536781 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642785719 |
Product | acyl-CoA thioester hydrolase YfbB |
Protein accession | YP_002216376 |
Protein GI | 198243209 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00598559 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTTGC ACGCGCAGCA CATGCCCGGA CAGCCTGGGA CGTCCTCGCT GGTTTTCCTG CACGGTTTTT CTGGCGATTG CCGCGAATGG CAGCCGGTTG GCGAACAGTT TCACGGCTGT TCGCGGCTCT ATATTGACTT ACCGGGACAT GGCGGATCTG CGGCTATTCC GGTCGGCGGC TTTGCCGATG TCATCAGATT ACTGCGCGCT ACGTTAATTA GTTACAACAT ACTAAAGTTT TGGTTGGTGG GATACTCTCT TGGCGGCCGG GTGGCGATGA TGGCAGCCTG CCAGGGAATA CCAGGCCTGT GCGGCCTGGT GGTCGAAGGC GGTCATCCGG GGCTGCAAAA TGAACAGGCG CGCGCTGAAA GACGATTGTC CGACGGGCGC TGGGCAGAGC GTTTTCGTCA TGAACCCTTG ACTGAGGTTT TTCACGACTG GTATCAGCAG CCGGTGTTCG CCTCGCTGAC GGCGCAGCAA AGACAGGCGC TAACGGCGCT GCGTAGCCAG AATAACGGCG AAACGCTGGC TGCGATGCTG GAGGCGACAT CGCTTGCCGT CCAGCCGGAT TTACGCGAGG CGCTCAACGC GCTGGCATTT CCGTTTTATT ATTTATGTGG CGAACGCGAC AGCAAATTCC GTGCCCTGGC GCAGGAAGTG GCGGCGACAT GCCATGTTAT TCGTAACGCC GGACACAACG CGCATCGGGA AAACCCCGCT GGCGTGGTAG ACAGTCTGGC TCAGATTCTG CGTCTCTGA
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Protein sequence | MMLHAQHMPG QPGTSSLVFL HGFSGDCREW QPVGEQFHGC SRLYIDLPGH GGSAAIPVGG FADVIRLLRA TLISYNILKF WLVGYSLGGR VAMMAACQGI PGLCGLVVEG GHPGLQNEQA RAERRLSDGR WAERFRHEPL TEVFHDWYQQ PVFASLTAQQ RQALTALRSQ NNGETLAAML EATSLAVQPD LREALNALAF PFYYLCGERD SKFRALAQEV AATCHVIRNA GHNAHRENPA GVVDSLAQIL RL
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