Gene SeD_A2652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2652 
Symbol 
ID6873225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2536023 
End bp2536781 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content58% 
IMG OID642785719 
Productacyl-CoA thioester hydrolase YfbB 
Protein accessionYP_002216376 
Protein GI198243209 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00598559 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTTGC ACGCGCAGCA CATGCCCGGA CAGCCTGGGA CGTCCTCGCT GGTTTTCCTG 
CACGGTTTTT CTGGCGATTG CCGCGAATGG CAGCCGGTTG GCGAACAGTT TCACGGCTGT
TCGCGGCTCT ATATTGACTT ACCGGGACAT GGCGGATCTG CGGCTATTCC GGTCGGCGGC
TTTGCCGATG TCATCAGATT ACTGCGCGCT ACGTTAATTA GTTACAACAT ACTAAAGTTT
TGGTTGGTGG GATACTCTCT TGGCGGCCGG GTGGCGATGA TGGCAGCCTG CCAGGGAATA
CCAGGCCTGT GCGGCCTGGT GGTCGAAGGC GGTCATCCGG GGCTGCAAAA TGAACAGGCG
CGCGCTGAAA GACGATTGTC CGACGGGCGC TGGGCAGAGC GTTTTCGTCA TGAACCCTTG
ACTGAGGTTT TTCACGACTG GTATCAGCAG CCGGTGTTCG CCTCGCTGAC GGCGCAGCAA
AGACAGGCGC TAACGGCGCT GCGTAGCCAG AATAACGGCG AAACGCTGGC TGCGATGCTG
GAGGCGACAT CGCTTGCCGT CCAGCCGGAT TTACGCGAGG CGCTCAACGC GCTGGCATTT
CCGTTTTATT ATTTATGTGG CGAACGCGAC AGCAAATTCC GTGCCCTGGC GCAGGAAGTG
GCGGCGACAT GCCATGTTAT TCGTAACGCC GGACACAACG CGCATCGGGA AAACCCCGCT
GGCGTGGTAG ACAGTCTGGC TCAGATTCTG CGTCTCTGA
 
Protein sequence
MMLHAQHMPG QPGTSSLVFL HGFSGDCREW QPVGEQFHGC SRLYIDLPGH GGSAAIPVGG 
FADVIRLLRA TLISYNILKF WLVGYSLGGR VAMMAACQGI PGLCGLVVEG GHPGLQNEQA
RAERRLSDGR WAERFRHEPL TEVFHDWYQQ PVFASLTAQQ RQALTALRSQ NNGETLAAML
EATSLAVQPD LREALNALAF PFYYLCGERD SKFRALAQEV AATCHVIRNA GHNAHRENPA
GVVDSLAQIL RL