Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2635 |
Symbol | |
ID | 6873914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2519366 |
End bp | 2520571 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642785702 |
Product | mandelate racemase/muconate lactonizing enzyme family protein |
Protein accession | YP_002216359 |
Protein GI | 198245002 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.944785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTCTTC CTAAAATTAA ACACGTTCGA GCCTGGTTTA TTGGGGGCGC TACCGCAGAG AAAGGGGCTG GCGGCGGGGA TTATCACGAC CAGGGAGGAA ATCACTGGAT TGATGACCAT ATCGCCACTC CCATGAGCAA ATATCGCGAC TATGAGCAGT CTCGTCAGTC TTTTGGGATC AACGTGTTAG GGACGCTGAT TGTCGAAGTA GAGGCGGAAA ATGGGCAGAC GGGGTTCGCC GTTTCGACAG CAGGGGAGAT GGGCTGTTTT ATCGTAGAAA AACATCTTAA CCGGTTTATT GAAGGCAAAT GCGTAAGCGA TATCAAACTT ATTCACGATC AGATGCTCGG CGCGACCATG TACTACTCCG GTTCCGGCGG TCTGGTGATG AACACGATTT CCTGTGTGGA TCTGGCGTTG TGGGATTTGT TTGGCAAGGT GGTTGGGCTG CCGGTTTATA AATTGCTGGG CGGAGCGGTG CGCGATGAAA TTCAGTTTTA CGCCACCGGC GCACGCCCGG ATCTGGCTAA AGAAATGGGC TTTATCGGCG GTAAAATGCC GACTCACTGG GGACCGCACG ATGGTGATGC GGGGATCCGT AAAGATGCCG CGATGGTGGC GGATATGCGT GAAAAGTGCG GGCCGGATTT CTGGCTGATG CTCGACTGCT GGATGAGTCA GGATGTGAAC TATGCGACTA AACTGGCTCA CGCCTGTGCG CCATTTAATC TCAAATGGAT TGAAGAGTGT CTGCCGCCGC AGCAGTATGA AGGCTATCGC GAATTAAAAC GCAACGCGCC TGCAGGGATG ATGGTTACCA GCGGCGAACA CCATGGTACG CTGCAATCCT TCCGCACTCT GGCAGAAACC GGCATTGATA TTATGCAGCC GGATGTTGGC TGGTGCGGCG GATTAACCAC GCTGGTTGAG ATCGCCGCGC TTGCCAAATC GCGCGGGCAA CTGGTGGTGC CGCACGGTTC GTCTGTCTAT TCGCACCATG CAGTTATTAC TTTCACTAAT ACCCCTTTCA GCGAGTTCCT GATGACCAGC CCGGACTGCT CCACCCTGCG TCCGCAATTT GACCCGATTC TCCTGGATGA GCCGGTGCCG GTGAATGGAC GCATTCATAA ATCAGTGCTG GATAAGCCGG GCTTCGGCGT CGAGCTTAAC CGTGACTGTC ACTTGAAACG CCCTTATAGC CACTAA
|
Protein sequence | MTLPKIKHVR AWFIGGATAE KGAGGGDYHD QGGNHWIDDH IATPMSKYRD YEQSRQSFGI NVLGTLIVEV EAENGQTGFA VSTAGEMGCF IVEKHLNRFI EGKCVSDIKL IHDQMLGATM YYSGSGGLVM NTISCVDLAL WDLFGKVVGL PVYKLLGGAV RDEIQFYATG ARPDLAKEMG FIGGKMPTHW GPHDGDAGIR KDAAMVADMR EKCGPDFWLM LDCWMSQDVN YATKLAHACA PFNLKWIEEC LPPQQYEGYR ELKRNAPAGM MVTSGEHHGT LQSFRTLAET GIDIMQPDVG WCGGLTTLVE IAALAKSRGQ LVVPHGSSVY SHHAVITFTN TPFSEFLMTS PDCSTLRPQF DPILLDEPVP VNGRIHKSVL DKPGFGVELN RDCHLKRPYS H
|
| |