Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2609 |
Symbol | |
ID | 6873157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2485429 |
End bp | 2486481 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642785679 |
Product | thiamine biosynthesis lipoprotein ApbE |
Protein accession | YP_002216336 |
Protein GI | 198242105 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 0.425275 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATGA CTTTTTGCCG GGCCGTGTGT CTGGCGGCGG CTTTTCTACT TATGGGCTGC GATGAGGCTC CCGAAACGAC AACAGCGTCA CCTGCCGCTC AGGTGCTGGA AGGTAAAACG ATGGGGACCC TCTGGCGGGT GAGCGTGGTT GGTATCGATG CGAAACGCGC CGCAGAGTTA CAGACTAAAA TCCAGACTCA GCTTGATGCT GATGATTGGT TGCTTTCTAC CTATAAAAAT GACTCCGCGC TGATGCGTTT TAACCATTCA CGCAGCCTTG CGCCCTGGCC GGTCAGCGAA GCCATGGCGG ATATCGTGAC CTCGGCGCTA CGTATTGGCG CGAAGACGGA CGGCGCGATG GATATCACCG TGGGCCCGCT GGTCAATCTG TGGGGGTTTG GGCCGGATCG GCAGCCGATG CATATCCCAA CACCAGCACA AATCGATGCG GCAAAAGCGA AAACAGGCCT GCAACATTTG CAGGTTATCG ACAGGGCTGG ACATCAGTTT TTGCAAAAAG ATCTGCCGGA TCTTTATGTT GATCTCTCCA CGGTCGGGGA GGGCTATGCG GCGGATCATC TGGCGCGACT GATGGAGCAG GAGGGCATTG CGCGTTATCT GGTCTCGGTG GGGGGCGCAT TAAGCAGCCG CGGGATGAAT GCGCAGGGGC AGCCGTGGCG CGTCGCGATT CAGAAGCCGA CCGACCGGGA AAACGCGGTG CAGGCGATTG TGGATATCAA CGGGCATGGC ATCAGCACCT CCGGCAGCTA CCGTAACTAT TATGAGCTGG ATGGCAAGCG TATCTCGCAC GTTATCGATC CGCAAACGGG GCGCCCCATT GAACACAACC TGGTATCGGT TACGGTCATC GCGCCAACGG CGCTGGAAGC GGACGGCTGG GACACCGGCC TGATGGTGCT CGGTACGCAA AAGGCGCAAG AGGTCGTGCG GCGGGAAGGG CTGGCGGTCT TTATGATCAT GAAAGAAGGT GAAGGCTTTA AAACCTGGAT GTCGCCGCAG TTCAAAACGT TCATGGTGAG CGATAAGAAT TAA
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Protein sequence | MKMTFCRAVC LAAAFLLMGC DEAPETTTAS PAAQVLEGKT MGTLWRVSVV GIDAKRAAEL QTKIQTQLDA DDWLLSTYKN DSALMRFNHS RSLAPWPVSE AMADIVTSAL RIGAKTDGAM DITVGPLVNL WGFGPDRQPM HIPTPAQIDA AKAKTGLQHL QVIDRAGHQF LQKDLPDLYV DLSTVGEGYA ADHLARLMEQ EGIARYLVSV GGALSSRGMN AQGQPWRVAI QKPTDRENAV QAIVDINGHG ISTSGSYRNY YELDGKRISH VIDPQTGRPI EHNLVSVTVI APTALEADGW DTGLMVLGTQ KAQEVVRREG LAVFMIMKEG EGFKTWMSPQ FKTFMVSDKN
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