Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2596 |
Symbol | ccmB |
ID | 6874616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2473551 |
End bp | 2474210 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642785667 |
Product | heme exporter protein CcmB |
Protein accession | YP_002216324 |
Protein GI | 198242457 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 0.395869 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATGTGGC GTGTCTTCTG TCTCGAGCTG CGCGTGGCGT TCCGCCACGG CGCGGACATC GCCGGCCCGC TGTGGTTCTT CCTGATGGTC ATCACCCTGT TTCCGTTAAG CGTCGGGCCG CAGCCGCAGC TGCTGGCGCG TATCGCGCCG GGCATCATCC AGGTGGCGGC GCTGCTGGCC TCGCTGCTGG CGCTGGAGCG GCTGTTTCGC GACGACCTGC AGGACGGCAG CCTGGAGCAG CTGATGCTGC TGCCGGTGCC GCTGCCGGCG GTGGTGCTGG CGAAGGTGCT GGCCCACTGG GCGGTGACCG GCCTGCCGCT GATGATGCTC TCCCCGCTGG TGGCGCTGCT GCTGGGGATG GACGTGTACG GCTGGAAAAT CATGGCGCTG ACGCTGCTGC TCGGCACGCC GGCGCTGGGG TTTCTCGCCG CGCCGGGCGT CGCGCTGACG GCCGGCCTGC GGCGCGGCGG CGTCCTGCTG GGCATTCTGG TGCTGCCGCT GAGTGTCCCG GTGCTGATTT TCGCCACCGC GGCGATGGAC GCGGCATCGA TGCATTTACC CGTTGACGGC TATCTGGCGG TGCTGGGGGC GCTGCTGGCG GGCAGCGCGA CGTTAAGCCC GTTCGCCACC GCGGCGGCGC TGCGCCTCAG CGTGCAGTAG
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Protein sequence | MMWRVFCLEL RVAFRHGADI AGPLWFFLMV ITLFPLSVGP QPQLLARIAP GIIQVAALLA SLLALERLFR DDLQDGSLEQ LMLLPVPLPA VVLAKVLAHW AVTGLPLMML SPLVALLLGM DVYGWKIMAL TLLLGTPALG FLAAPGVALT AGLRRGGVLL GILVLPLSVP VLIFATAAMD AASMHLPVDG YLAVLGALLA GSATLSPFAT AAALRLSVQ
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