Gene SeD_A2590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2590 
Symbol 
ID6874150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2468534 
End bp2469577 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content67% 
IMG OID642785661 
Productcytochrome c-type biogenesis protein H2 
Protein accessionYP_002216318 
Protein GI198244333 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes
[COG4235] Cytochrome c biogenesis factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.124545 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGT TACCGGGCAT GGTGATGCTG ATGCTGGTGC TGGTTATCTC CGGGTCAGCG 
CGGGCGACCA CCGACGTGAT GCCGTTTAAA GATGAAGCGC AGGAGCAGCA GTTCCGCCAG
CTCACGGAGC AGCTGCGCTG CCCGAAATGC CAGAACAACA GCATTGCGGA CTCGAACGCG
ATGATAGCCA CCGACATGCG CCGCAGGGTG TATGACCTGA TGCAGGAGGG GAAGAGCCGC
CAGGAAATCA TCGATTACAT GGTGGCGCGC TACGGCAACT TCGTCACCTA CGACCCGCCG
CTGACCCCGC TGACGGTGCT GCTGTGGGTG CTGCCGCTGG CCGCCATCGT GGCGGGCGGG
TGGATAATCG TTGCCCGCAC GCGCCGGCGG GTGCGCCTGC GCCGGGAACC GCTGCCGGCG
GACACCCCGG TTTGCGGCGC GCGCGCCGGG TGGGGCGTTT ACGTGCCGGG GGCCGTCATT
GCGCTGGCGG TCGGCGCCGG CAGCTACGCC CTGACCGGCA GCTATCAGCA GGTCAGGGCC
TGGCAGCAGG CAACGGCGCA GACGCCCGGG CTGCTGGCGC GGGCGCTGGA CCCGGCGGCG
CAGCCGCTGA ATGAAGAGGA GATGGCGCGG CTGGCGCTGG GGCTGCGCAC CCGCCTGCAG
AATGATGCCG GCAATGTTGA GGGCTGGCTC ATGCTGGGGC GCACCGGTAT GGTACTGGGT
AATGCCGGTA CCGCCACCGG GGCGTATGCG AACGCCTACC GTCTGGCCCC GAAAAACAGC
GATGCGGCGC TGGGCTACGC GGAGGCGCTG ACGCGCTCGT CCGACCCGGA GGATAACCGC
CGCGGCGGGG AGCTGCTGCG TCAGCTGGTG AGCCGCGACC ACACGGATAT CCGGGTGTTA
AGCCTGTATG CGTTTAACGC CTTTGAGCAG CAGCGCTTTG GCGAGGCGGT GGCGGCCTGG
GAGATGATGC TGAAACTGTT GCCGGCAGAC GATACCCGGC GGGCGGTGAT AGAGCGCAGT
ATCCGGCTGG CGCAGGAGAA ATAA
 
Protein sequence
MRLLPGMVML MLVLVISGSA RATTDVMPFK DEAQEQQFRQ LTEQLRCPKC QNNSIADSNA 
MIATDMRRRV YDLMQEGKSR QEIIDYMVAR YGNFVTYDPP LTPLTVLLWV LPLAAIVAGG
WIIVARTRRR VRLRREPLPA DTPVCGARAG WGVYVPGAVI ALAVGAGSYA LTGSYQQVRA
WQQATAQTPG LLARALDPAA QPLNEEEMAR LALGLRTRLQ NDAGNVEGWL MLGRTGMVLG
NAGTATGAYA NAYRLAPKNS DAALGYAEAL TRSSDPEDNR RGGELLRQLV SRDHTDIRVL
SLYAFNAFEQ QRFGEAVAAW EMMLKLLPAD DTRRAVIERS IRLAQEK