Gene SeD_A2589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2589 
Symbol 
ID6875622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2467843 
End bp2468490 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content52% 
IMG OID642785660 
Producttranscriptional regulator NarP 
Protein accessionYP_002216317 
Protein GI198244741 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.167087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAG TAACACCTTT TCAGGTGCTT ATTGTGGACG ACCATCCACT TATGCGGCGA 
GGTATTCGTC AATTACTGGA ACTGGACCCG GCTTTTCATG TCGTTGCCGA AGCGGGTGAC
GGGGCGAGTG CGATCGATCT GGCGAATCGC ATTGAGCCCG ATCTGATCCT GCTGGATCTG
AATATGAAAG GTCTGAGCGG GTTAGATACC CTGAACGCGC TACGCCGGGA TGGTGTGACG
GCGCAAATTA TTATTCTTAC CGTCTCGGAT TCCGCCAGCG ACATCTACGC GCTGATCGAC
GCCGGCGCCG ACGGTTATCT GCTCAAAGAT AGCGATCCGG AAGTGCTGCT GGAGGCCATT
CGCAAAGGCG CTAACGGCGG TAAAGTCTTT AGCGATCGGG TCAATGAATA TCTGCGTGAG
CGCGAACGGT TTGGCGCGCA GGAAGATCCC TTTAGTATCC TGACCGAACG AGAGTTAGAT
GTCTTGCATG AGCTGGCGCA GGGGCTTTCT AACAAACAGA TTGCGTCAGT ACTGAATATT
TCTGAGCAGA CGGTTAAGGT GCACATTCGT AATCTACTTC GCAAGCTAAA CGTGCGCTCA
CGCGTCGCGG CGACCATTCT ATTTTTACAA ACACGCGGAA TACAGTAA
 
Protein sequence
MPEVTPFQVL IVDDHPLMRR GIRQLLELDP AFHVVAEAGD GASAIDLANR IEPDLILLDL 
NMKGLSGLDT LNALRRDGVT AQIIILTVSD SASDIYALID AGADGYLLKD SDPEVLLEAI
RKGANGGKVF SDRVNEYLRE RERFGAQEDP FSILTERELD VLHELAQGLS NKQIASVLNI
SEQTVKVHIR NLLRKLNVRS RVAATILFLQ TRGIQ