| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2565 |
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| Symbol | spr |
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| ID | 6873407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 2444184 |
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| End bp | 2444756 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642785640 |
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| Product | putative outer membrane lipoprotein |
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| Protein accession | YP_002216298 |
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| Protein GI | 198245806 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.159761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.000144355 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGTCAAAT CTCAACCGAT TTTGAGATAT ATTTTGCGCG GGATTCCTGC GATTGCAGTT
GCGGTTCTGC TTTCTGCTTG TAGCACAACC ACCAATACCG CAAAGAATAT GCATTCTGAG
ACGCATGCTG TGGGCAATAG CGATAGCTCT TCACTGCAAG CCTCTCAGGA TGAATTTGAA
AATATGGTGC GTAACCTCGA CGTTAAGTCG CGGATTATGG ATCAGTATGC TGACTGGAAA
GGCGTGCGTT ACCGCCTGGG CGGCAGCACT AAGAAAGGCG TCGACTGTTC CAGCTTTGTA
CAGCGCACCT TCCGTGAACA GTTTGGTTTA GAGCTTCCGC GTTCAACCTA TGAACAGCAG
GAAATGGGCA AAGCGGTTTC ACGCAATAAC CTGCGTACGG GCGATCTGGT TCTGTTCCGC
GCCGGTTCCA CTGGTCGTCA TGTCGGTATT TATATCGGCA ATAACCAGTT TGTCCATGCG
TCTACCAGTA GCGGCGTCAT TATCTCCAGT ATGAACGAAC CGTACTGGAA AAAACGCTAC
AATGAAGCGC GTCGAGTTCT GAGCCGCAGT TAA
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| Protein sequence | MVKSQPILRY ILRGIPAIAV AVLLSACSTT TNTAKNMHSE THAVGNSDSS SLQASQDEFE
NMVRNLDVKS RIMDQYADWK GVRYRLGGST KKGVDCSSFV QRTFREQFGL ELPRSTYEQQ
EMGKAVSRNN LRTGDLVLFR AGSTGRHVGI YIGNNQFVHA STSSGVIISS MNEPYWKKRY
NEARRVLSRS
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