Gene SeD_A2564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2564 
Symbol 
ID6871973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2443024 
End bp2443770 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content51% 
IMG OID642785639 
Productinner membrane protein YeiU 
Protein accessionYP_002216297 
Protein GI198244049 
COG category[I] Lipid transport and metabolism 
COG ID[COG0671] Membrane-associated phospholipid phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00168101 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0000332566 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCCACCGT TTAAAAACTA TGGCGAAATG ACGATGAAAA CCCGCTATTC CTTGATAATT 
CTGCTTAATG CCGCCGGTCT GGCGCTGTTT TTGTCATGGT ATCTTCCCGT CAATCACGGT
TTCTGGTTCA CCATTGATTC CGGCATATTC CACTTCTTTA ACCAGAAACT GGTGGAAAGC
CACGCGTTCC TCTGGTGGGT CGCTATTACC AATAATCGGG CGTTTGACGG CTGTTCGCTG
CTGGCGATGG GCGGACTGAT GCTCAGTTTC TGGCTAAAAG AAGACGCGTC GGGCCGGCGG
CGCATTGTGA TAATCGGATT GGTCATGCTG CTAACAGCGG TGGTGCTTAA CCAACTCGGT
CAGGCGCTGA TCCCCGTCAA GCGCGCCAGC CCAACGCTCT CTTTTGAGCA TATTTATCGC
GTCAGCGAGT TGCTGCACAT CCCGACAAAA GACGCGTCAA AAGACAGTTT CCCAGGCGAT
CACGGTATGA TGCTGCTGAT ATTTTCCGCC TTTATGCTGC GTTATTTCGG CAAAACGGCG
GGGATTATCG CCCTTATTAT ATTTGTGGTT TTCGCGTTTC CGCGCGTTAT GATTGGCGCT
CACTGGTTCA CCGATATTGT GGTCGGGTCA CTCACGGTTA TTTTGATTGG CCTCCCCTGG
TGGCTGATGA CCCCGCTCAG CGACCGGGCG ATAACGCTTT TTGAGAATTA TCTCCCGGGC
GGAAATAAAC AAATTTTAAA CAAATAA
 
Protein sequence
MPPFKNYGEM TMKTRYSLII LLNAAGLALF LSWYLPVNHG FWFTIDSGIF HFFNQKLVES 
HAFLWWVAIT NNRAFDGCSL LAMGGLMLSF WLKEDASGRR RIVIIGLVML LTAVVLNQLG
QALIPVKRAS PTLSFEHIYR VSELLHIPTK DASKDSFPGD HGMMLLIFSA FMLRYFGKTA
GIIALIIFVV FAFPRVMIGA HWFTDIVVGS LTVILIGLPW WLMTPLSDRA ITLFENYLPG
GNKQILNK