Gene SeD_A2529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2529 
Symbol 
ID6873194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2408862 
End bp2409557 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content56% 
IMG OID642785608 
Producthypothetical protein 
Protein accessionYP_002216266 
Protein GI198246098 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1346] Putative effector of murein hydrolase 
TIGRFAM ID[TIGR00659] conserved hypothetical protein TIGR00659 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACAT ATATCTGGTG GTCGTTACCG CTGACGCTGG CGGTATTTTT CGCCGCCCGC 
AGACTGGCGG CGCATTTTAA AATGCCGTTG CTGAATCCGC TGCTGGTGGC AATGGTAGTC
ATTATTCCTT TTCTGTTGCT GACCGGTATT CCCTACGAGC ACTACTTCAA AGGCAGCGAA
GTACTTAACG ATCTGCTGCA ACCGGCGGTA GTGGCACTGG CCTATCCCCT TTATGAACAA
TTGCACCAGA TTCGCGCGCG TTGGAAATCC ATTATTAGCA TCTGTTTTGT CGGCAGTCTG
GTAGCGATGA TTACCGGAAC ATCCGTTGCC TTGCTGATGG GCGCAACGCC TGAAATCGCG
GCATCGGTAC TGCCTAAATC CGTGACTACG CCTATCGCGA TGGCGGTGGG CGGCAGCATC
GGCGGCATCC CCGCGATCAG CGCGGTATGC GTAATTTTTG TCGGTATTCT GGGCGCGGTG
TTTGGCCACA CGCTGTTAAA CGCGATGCAC ATCCGTACTA AGGCCGCACG CGGGCTGGCA
ATGGGGACCG CCTCACATGC GCTCGGTACT GCGCGCTGTG CCGAGCAGGA TTACCAGGAA
GGCGCGTTTA GCTCCCTGGC GCTGGTGATC TGCGGCATTA TTACCTCGCT GGTAGCGCCC
TTTTTGTTTC CGCTCATTCT GGCGGTAATG CGCTAA
 
Protein sequence
MMTYIWWSLP LTLAVFFAAR RLAAHFKMPL LNPLLVAMVV IIPFLLLTGI PYEHYFKGSE 
VLNDLLQPAV VALAYPLYEQ LHQIRARWKS IISICFVGSL VAMITGTSVA LLMGATPEIA
ASVLPKSVTT PIAMAVGGSI GGIPAISAVC VIFVGILGAV FGHTLLNAMH IRTKAARGLA
MGTASHALGT ARCAEQDYQE GAFSSLALVI CGIITSLVAP FLFPLILAVM R