Gene SeD_A2507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2507 
Symbol 
ID6872412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2386912 
End bp2387643 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content54% 
IMG OID642785587 
ProductMerR family transcriptional regulator 
Protein accessionYP_002216245 
Protein GI198245516 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.54567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTT ACACAATTGG TGAAGTGGCT TTGCTTTGTG ATATCAATCC TGTCACGTTG 
CGCGCGTGGC AGAGACGTTA TGGACTTTTA AAACCACAGC GAACGGATGG CGGTCATCGT 
CTGTTTAACG ATGCCGATAT CGACAGAATC CGCGAAATCA AGCGCTGGAT AGATAACGGC 
GTCCAGGTCA GCAAAGTCAA AGTGCTGCTC AGTAGCGACA GTAGCGAACA ACCTAACGGC 
TGGCGCGAAC AGCAGGAGAT CCTGCTGCAC TACCTGCAAA GCAGTAATCT GCACAGTTTA 
CGGTTATGGG TCAAAGAACG CGGTCAGGAT TATCCTGCCC AAACATTGAC CACTAACCTG 
TTCGTCCCAC TGTGGCGACG ATTACAGTGC CAACAACCCG CCCTTCAGGC GCTGCTCGGC 
ATTCTTGACG GTATCCTGAT CAACTATATT GCGCTCTGCC TGGCGTCTGC GCGTAAGAAA 
CAGGGAAAAG ATGCGTTGGT GATCGGCTGG AATATCCATG ATACCACCCG CCTGTGGCTG 
GAAGGTTGGG TCGCCAGCCA ACAGGGATGG CGAATCGACG TGTTGGCGCA TTCGCTTAGC 
CAGTTCCGCC CGGAACTTTT TGACGGCAAG ACGTTACTGG TATGGTGCGG AGAAAACCAG 
ACGCTGGCGC AGCAGCAGCA ACTCCTGGCA TGGCGCGCCC AGGGACACGA CATTCATCCC 
CTTGGCGTTT AA
 
Protein sequence
MALYTIGEVA LLCDINPVTL RAWQRRYGLL KPQRTDGGHR LFNDADIDRI REIKRWIDNG 
VQVSKVKVLL SSDSSEQPNG WREQQEILLH YLQSSNLHSL RLWVKERGQD YPAQTLTTNL 
FVPLWRRLQC QQPALQALLG ILDGILINYI ALCLASARKK QGKDALVIGW NIHDTTRLWL 
EGWVASQQGW RIDVLAHSLS QFRPELFDGK TLLVWCGENQ TLAQQQQLLA WRAQGHDIHP 
LGV