Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2449 |
Symbol | gmd |
ID | 6874205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2324226 |
End bp | 2325347 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642785538 |
Product | GDP-mannose 4,6-dehydratase |
Protein accession | YP_002216196 |
Protein GI | 198245271 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1089] GDP-D-mannose dehydratase |
TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.0119174 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAAG TCGCTCTCAT TACTGGCGTA ACCGGACAGG ATGGGTCTTA CCTGGCAGAA TTTCTGCTGG AAAAAGGGTA TGAGGTGCAT GGTATCAAGC GCCGCGCGTC ATCGTTTAAT ACCGAGCGCG TGGACCATAT TTATCAGGAC CCGCACAGCT GCAACCCGAA ATTTCATCTG CATTATGGCG ACCTGACCGA CGCCTCCAAC CTGACCCGCA TTTTACAGGA AGTGCAGCCG GATGAGGTCT ACAACCTGGG CGCGATGAGC CATGTGGCGG TGTCGTTTGA GTCGCCGGAA TATACCGCCG ATGTGGATGC GATGGGCACG CTGCGCCTGC TGGAGGCGAT CCGCTTCCTC GGTCTTGAAA AGAAAACGCG GTTCTACCAG GCCTCCACCT CTGAACTGTA CGGGCTGGTG CAGGAGATCC CGCAGAAAGA GACCACGCCG TTCTACCCGC GTTCCCCCTA TGCGGTGGCG AAACTGTACG CCTACTGGAT CACCGTTAAC TACCGTGAAT CCTACGGTAT TTACGCCTGT AACGGCATTC TGTTTAACCA CGAGTCCCCG CGTCGCGGCG AAACCTTCGT CACCCGTAAG ATCACCCGCG CCATCGCCAA TATCGCCCAG GGACTGGAGT CCTGCCTGTA TCTCGGCAAC ATGGACTCGC TGCGCGACTG GGGTCATGCG AAAGATTACG TGCGGATGCA GTGGATGATG TTACAGCAGG AGCAGCCGGA AGATTTCGTG ATTGCCACCG GCGTGCAGTA TTCCGTGCGC CAGTTTGTGG AGCTGGCGGC GGCGCAACTG GGGATAAAAC TGCGCTTTGA AGGCGAAGGC ATTAATGAGA AAGGGATTGT GGTATCCGTT ACCGGACACG ATGCGCCGGG CGTGAAACCG GGCGATGTGA TTGTGGCCGT TGATCCGCGT TATTTCCGTC CGGCGGAAGT GGAAACCCTG CTGGGCGACC CGTCCAAAGC GCATGAGAAA CTGGGCTGGA AACCGGAAAT CACCCTGTCG GAGATGGTCT CCGAGATGGT GGCGAACGAT CTGGAGGCCG CGAAAAAACA CTCACTGCTG AAATCTCACG GTTACGAGGT GGCCATCGCG CTGGAGTCCT GA
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Protein sequence | MSKVALITGV TGQDGSYLAE FLLEKGYEVH GIKRRASSFN TERVDHIYQD PHSCNPKFHL HYGDLTDASN LTRILQEVQP DEVYNLGAMS HVAVSFESPE YTADVDAMGT LRLLEAIRFL GLEKKTRFYQ ASTSELYGLV QEIPQKETTP FYPRSPYAVA KLYAYWITVN YRESYGIYAC NGILFNHESP RRGETFVTRK ITRAIANIAQ GLESCLYLGN MDSLRDWGHA KDYVRMQWMM LQQEQPEDFV IATGVQYSVR QFVELAAAQL GIKLRFEGEG INEKGIVVSV TGHDAPGVKP GDVIVAVDPR YFRPAEVETL LGDPSKAHEK LGWKPEITLS EMVSEMVAND LEAAKKHSLL KSHGYEVAIA LES
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