| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2436 |
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| Symbol | rfbD |
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| ID | 6874879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 2308249 |
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| End bp | 2309148 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642785525 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_002216183 |
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| Protein GI | 198242562 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.0000731521 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATATCT TACTTTTTGG TAAGACAGGG CAAGTAGGCT GGGAGTTGCA ACGTTCTCTG
GCACCAGTAG GGAATCTGAT TGCCCTGGAT GTCCATTCAA AAGAGTTTTG CGGTGATTTT
AGTAATCCGA AAGGCGTTGC CGAAACCGTT CGTAAGCTTC GTCCCGATGT GATTGTTAAC
GCAGCAGCAC ATACTGCAGT AGATAAAGCA GAGTCTGAAC CAGAACTGGC GCAGTTACTT
AACGCCACCA GTGTGGAAGC CATCGCTAAA GCAGCCAACG AAACTGGCGC ATGGGTAGTG
CATTATTCAA CCGATTATGT ATTTCCTGGT ACCGGCGATA TCCCATGGCA GGAAACGGAC
GCTACGTCGC CGCTGAATGT CTATGGCAAG ACCAAACTGG CGGGAGAAAA GGCCCTGCAG
GATAACTGCC CTAAGCATCT TATCTTCCGC ACCAGTTGGG TTTATGCAGG TAAGGGCAAT
AATTTCGCAA AGACAATGCT TCGTCTGGCG AAAGAGCGTC AGACACTTTC AGTCATCAAC
GATCAGTACG GTGCGCCAAC CGGTGCAGAA TTACTGGCTG ACTGCACGGC TCATGCGATC
CGTGTGGCGT TAAAGAAACC AGAAGTCGCA GGTCTTTACC ATCTGGTTGC CGGGGGAACC
ACAACCTGGC ATGACTACGC GGCCTTAGTC TTTGACGAGG CGCGCAAAGC AGGGATAACG
CTTGCGCTGA CTGAGCTTAA TGCTGTGCCG ACCAGCGCCT ACCCGACGCC GGCGAGCAGA
CCAGGCAATT CGCGTCTCAA TACTGAAAAG TTTCAGCGTA ATTTTGACCT TATTCTGCCG
CAATGGGAAT TAGGAGTTAA GCGCATGCTG ACTGAAATGT TTACGACGAC AACCATCTGA
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| Protein sequence | MNILLFGKTG QVGWELQRSL APVGNLIALD VHSKEFCGDF SNPKGVAETV RKLRPDVIVN
AAAHTAVDKA ESEPELAQLL NATSVEAIAK AANETGAWVV HYSTDYVFPG TGDIPWQETD
ATSPLNVYGK TKLAGEKALQ DNCPKHLIFR TSWVYAGKGN NFAKTMLRLA KERQTLSVIN
DQYGAPTGAE LLADCTAHAI RVALKKPEVA GLYHLVAGGT TTWHDYAALV FDEARKAGIT
LALTELNAVP TSAYPTPASR PGNSRLNTEK FQRNFDLILP QWELGVKRML TEMFTTTTI
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