Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2435 |
Symbol | rfbA |
ID | 6875544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2307323 |
End bp | 2308207 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642785524 |
Product | glucose-1-phosphate thymidylyltransferase |
Protein accession | YP_002216182 |
Protein GI | 198245429 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0000704371 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAATGA AAACGCGTAA GGGCATTATT TTAGCGGGGG GCTCCGGCAC CCGTCTTTAT CCGGTGACCA TGGCGGTAAG TAAGCAATTG CTACCAATTT ATGATAAACC GATGATTTAC TATCCCCTTT CCACGCTTAT GCTGGCAGGC ATTCGGGATA TCCTGATCAT CAGTACGCCA CAGGACACGC CGCGTTTTCA ACAACTGCTG GGAGACGGCA GCCAGTGGGG GCTGAATCTT CAATATAAAG TACAGCCAAG CCCGGATGGC TTAGCACAGG CGTTTATTAT TGGTGAAGAG TTCATTGGTA ATGATGATTG TGCATTAGTA CTGGGTGACA ATATCTTTTA TGGTCATGAT TTACCAAAGT TAATGGAAGC TGCCGTTAAT AAAGAAAGTG GTGCTACCGT CTTTGCTTAT CATGTAAACG ATCCGGAGCG CTACGGTGTG GTTGAGTTTG ACCAAAGTGG CACAGCCGTT AGTCTGGAGG AAAAACCGTT ACAACCGAAG GGTAATTACG CGGTAACGGG GCTGTATTTT TATGATAATA GCGTGGTGGA GATGGCGAAA AATCTTAAGC CTTCCGCTCG CGGTGAGTTA GAAATCACGG ATATTAACCG TATCTATATG GATCAGGGAA GATTGTCTGT CGCCATGATG GGGCGCGGTT ATGCCTGGCT GGATACAGGG ACGCATCAGA GTTTGATAGA GGCCAGTAAT TTTATTGCAA CCATCGAAGA ACGCCAGGGG CTAAAAGTGT CCTGCCCGGA AGAGATCGCA TTTCGTAAAA ATTTTATAAA TGCACAACAG GTTATAGAAC TGGCCGGGCC ATTATCAAAA AATGATTATG GCAAATATTT GCTGAAGATG GTGAAAGGTT TATAA
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Protein sequence | MEMKTRKGII LAGGSGTRLY PVTMAVSKQL LPIYDKPMIY YPLSTLMLAG IRDILIISTP QDTPRFQQLL GDGSQWGLNL QYKVQPSPDG LAQAFIIGEE FIGNDDCALV LGDNIFYGHD LPKLMEAAVN KESGATVFAY HVNDPERYGV VEFDQSGTAV SLEEKPLQPK GNYAVTGLYF YDNSVVEMAK NLKPSARGEL EITDINRIYM DQGRLSVAMM GRGYAWLDTG THQSLIEASN FIATIEERQG LKVSCPEEIA FRKNFINAQQ VIELAGPLSK NDYGKYLLKM VKGL
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