Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2413 |
Symbol | hisH |
ID | 6872943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 2284505 |
End bp | 2285095 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642785503 |
Product | imidazole glycerol phosphate synthase subunit HisH |
Protein accession | YP_002216161 |
Protein GI | 198243392 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0118] Glutamine amidotransferase |
TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.00164327 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACGTCG TCATCCTTGA CACCGGCTGC GCCAATTTAA GCTCGGTAAA ATCCGCCGTG GCGCGCCACG GTTACACCCC GGTGGTCAGC CGCGAAGCGG AAATCGTATT ACGCGCTGAC AAACTCTTTC TGCCCGGCGT CGGCACGGCG CAGGCCGCTA TGGATCAACT GCGCGAACGT GAACTGATCG ACTTAATTAA AGCGTGTACT CAGCCGGTAC TGGGTATCTG CTTAGGGATG CAACTGCTGG GTCGTCGCAG CGAAGAGACG CGCGGCGTGG ATCTGCTGAA CATTATCGAA CAAGACGTGC CGAAAATGAC CGACTTTGGT CTGCCGCTGC CGCACATGGG CTGGAATCGC GTGTATCCGC AGGCGGGCAA CCGGCTGTTT CAGGGCATTG AAGATGGCGC CTATTTTTAC TTTGTTCACA GCTACGCGAT GCCGGTCAAC CCGTGGACTA TCGCCCAGTG CAATTACGGC GAGCCGTTTA CCGCGGCGGT ACAGAAAGAT AATTTCTTCG GCGTACAGTT CCATCCGGAA CGTTCGGGCG CGGCGGGCGC ACAGTTGCTG AAAAACTTCC TGGAGATGTA A
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Protein sequence | MNVVILDTGC ANLSSVKSAV ARHGYTPVVS REAEIVLRAD KLFLPGVGTA QAAMDQLRER ELIDLIKACT QPVLGICLGM QLLGRRSEET RGVDLLNIIE QDVPKMTDFG LPLPHMGWNR VYPQAGNRLF QGIEDGAYFY FVHSYAMPVN PWTIAQCNYG EPFTAAVQKD NFFGVQFHPE RSGAAGAQLL KNFLEM
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