| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2269 |
|---|
| Symbol | |
|---|
| ID | 6875310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 2164192 |
|---|
| End bp | 2165433 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642785367 |
|---|
| Product | phage portal protein, HK97 family |
|---|
| Protein accession | YP_002216029 |
|---|
| Protein GI | 198246051 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4695] Phage-related protein |
|---|
| TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0000000000275865 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGTTCTTTT CGGGATTATT TCAACGAAAA AGTGACGCGC CGGTGACCAC GCCAGCAGAG
CTGGCGGATG CTATCGGGCT GTCATACGAC ACCTATACCG GAAAGCAGAT CAGCAGTCAG
CGGGCCATGC GACTGACGGC GGTTTTTTCC TGCGTCAGAG TGCTGGCAGA GTCGGTCGGG
ATGTTGCCCT GCAACCTGTA TCACCTGAAC GGCAGCCTGA AACAGAGAGC CACTGGCGAA
CGTCTGCATA AGCTGATCTC CACGCATCCC AATAGCTATA TGACGCCGCA GGAGTTCTGG
GAGCTGGTGG TCACCTGTCT GTGCCTGCGG GGCAACTTTT ATGCCTACAA AGTGAAAGCA
TTTGGCGAAG TGGCTGAACT GCTGCCCGTC GATCCCGGTT GCGTGGTGCC GAAGCTTAAC
AGTAGCTGGG AGCCGGTCTA TCAGGTCACA TTCCCGGATG GCTCCACGGA TGTACTGAGC
CAGGAGGATA TCTGGCATGT GCGCACGCTG ACGCTGGACG GACTGGTGGG GCTGAATCCC
ATCGCCTATG CCCGCGAGGC AATATCGCTG GCGGCAGCGA CCGAAGAGCA CGGGGCCAGA
CTGTTCAGCA ATGGCGCGGT GACGTCGGGT GTGTTGCGTA CAGAGCAGAC GCTGTCGGAT
CAGGCTTATG AGCGCCTGAA GAAAGATTTT GAGGAGCGTC ACACCGGGCT TGGTAATGCT
CACCGCCCGA TGATCCTTGA GATGGGGCTG GACTGGAAGT CGATGGCGCT GAACGCCGAG
GACAGCCAGT TCCTGGAAAC CCGCAAGTTT CAGCTTGAAG AAATCTGTCG TCTGTTCCGG
GTGCCATTGC ACATGGTGCA GAACACCGAT CGCGCCACCT TCAACAATAT TGAAGAGCTG
GGGCTGGGAT TTATCAACTA TTCACTGGTG CCGTATCTGA CCCGCATCGA ACAGCGGATC
AACACCGGAC TGGTACGAAA AAGTAAGCAG GGCGTTTTTT ACGCCAAATT TAACGCGGGG
GCGTTACTGC GTGGGGATAT GAAGTCCCGT TTTGAAGCCT ATGCCACCGG GATCAACTGG
GGGATTTACT CTCCCAATGA CTGCCGCGAC CTGGAAGATA TGAATCCGCG TCCCGGTGGT
GATGTCTATC TCACACCGAT GAACATGACC ACGAAACCCT CCGATGGCAG TAAAGCCGGT
AAGCAGAAGG ATAACGCCAA TGCAGACGAA ACAACGTCTT GA
|
|---|
| Protein sequence | MFFSGLFQRK SDAPVTTPAE LADAIGLSYD TYTGKQISSQ RAMRLTAVFS CVRVLAESVG
MLPCNLYHLN GSLKQRATGE RLHKLISTHP NSYMTPQEFW ELVVTCLCLR GNFYAYKVKA
FGEVAELLPV DPGCVVPKLN SSWEPVYQVT FPDGSTDVLS QEDIWHVRTL TLDGLVGLNP
IAYAREAISL AAATEEHGAR LFSNGAVTSG VLRTEQTLSD QAYERLKKDF EERHTGLGNA
HRPMILEMGL DWKSMALNAE DSQFLETRKF QLEEICRLFR VPLHMVQNTD RATFNNIEEL
GLGFINYSLV PYLTRIEQRI NTGLVRKSKQ GVFYAKFNAG ALLRGDMKSR FEAYATGINW
GIYSPNDCRD LEDMNPRPGG DVYLTPMNMT TKPSDGSKAG KQKDNANADE TTS
|
|---|
| |