Gene SeD_A2166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2166 
SymbolptsG 
ID6871302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2079198 
End bp2080631 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content55% 
IMG OID642785272 
ProductPTS system glucose-specific transporter subunits IIBC 
Protein accessionYP_002215935 
Protein GI198244688 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components 
TIGRFAM ID[TIGR00826] PTS system, glucose-like IIB component
[TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component
[TIGR02002] PTS system, glucose-specific IIBC component 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00000000145643 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTAAGA ATGCATTTGC TAACCTGCAA AAGGTCGGTA AATCGCTGAT GCTGCCGGTA 
TCCGTACTCC CTATCGCAGG TATCCTGCTG GGTGTCGGTT CCGCTAACTT CAGCTGGCTG
CCAGCCGTTG TATCGCACGT TATGGCAGAA GCGGGCGGAT CTGTTTTTGC CAATATGCCG
CTGATTTTCG CTATCGGCGT GGCGTTGGGC TTCACCAACA ACGACGGCGT TTCGGCTCTG
GCGGCGGTAG TAGCGTATGG CATCATGGTG AAAACCATGG CTGTGGTTGC GCCGCTGGTT
CTGCATTTAC CTGCTGAAGA GATCGCCGCT AAACACCTTG CTGATACGGG TGTTCTCGGG
GGGATTATCT CCGGTGCGAT CGCAGCGTAT ATGTTTAACC GCTTCTACCG CATCAAACTG
CCTGAGTATC TGGGCTTCTT TGCGGGCAAA CGCTTCGTGC CGATCATTTC GGGTCTGGCC
GCTATTTTTA CCGGTGTGGT GCTGTCTTTC GTATGGCCGC CAATCGGTAC GGCTATCCAG
GCGTTCTCGC AGTGGGCGGC TTATCAGAAT CCGGTTGTCG CGTTTGGTAT TTACGGTTTT
ATCGAGCGTT GCCTGGTGCC GTTTGGTCTG CATCATATCT GGAACGTTCC TTTCCAGATG
CAGATCGGCG AATACACCAA CGCAGCGGGT CAGGTATTCC ACGGCGACAT TCCGCGCTAT
ATGGCGGGCG ACCCGACGGC GGGTATGTTG TCTGGCGGCT TCCTGTTCAA AATGTACGGT
CTGCCGGCTG CAGCCATTGC TATCTGGCAC TCTGCTAAAC CGGAAAACCG CGCAAAAGTG
GGCGGTATCA TGATTTCCGC CGCGCTGACC TCGTTTTTGA CGGGTATTAC CGAGCCTATC
GAGTTCTCCT TCATGTTCGT GGCGCCGATC CTGTACATCA TTCACGCGAT TCTGGCAGGT
CTGGCATTCC CGATCTGTAT CCTGCTGGGG ATGCGTGACG GTACGTCGTT CTCCCACGGT
CTGATCGACT TTATCGTGCT GTCCGGTAAC AGCAGCAAAT TGTGGCTGTT CCCGATTGTT
GGCGCCGGTT ATGCGATTGT GTACTACACC GTGTTCCGCG TGCTGATCAA AGCGCTGGAT
CTGAAAACGC CGGGTCGTGA AGACACTACT GATGACGCAA AAGCGGGGGC GACCAGCGAA
ATGGCGCCGG CTTTGGTTGC GGCGTTTGGC GGTAAAGAGA ACATCACTAA CCTGGATGCC
TGTATCACGC GTCTGCGCGT GAGCGTAGCC GATGTAGCGA AAGTGGATCA GGCTGGCCTG
AAGAAACTGG GCGCGGCAGG CGTTGTCGTC GCGGGTTCCG GCGTTCAGGC TATTTTCGGT
ACGAAATCCG ATAACCTGAA AACGGAAATG GATGAGTACA TCCGTAACAG CTAA
 
Protein sequence
MFKNAFANLQ KVGKSLMLPV SVLPIAGILL GVGSANFSWL PAVVSHVMAE AGGSVFANMP 
LIFAIGVALG FTNNDGVSAL AAVVAYGIMV KTMAVVAPLV LHLPAEEIAA KHLADTGVLG
GIISGAIAAY MFNRFYRIKL PEYLGFFAGK RFVPIISGLA AIFTGVVLSF VWPPIGTAIQ
AFSQWAAYQN PVVAFGIYGF IERCLVPFGL HHIWNVPFQM QIGEYTNAAG QVFHGDIPRY
MAGDPTAGML SGGFLFKMYG LPAAAIAIWH SAKPENRAKV GGIMISAALT SFLTGITEPI
EFSFMFVAPI LYIIHAILAG LAFPICILLG MRDGTSFSHG LIDFIVLSGN SSKLWLFPIV
GAGYAIVYYT VFRVLIKALD LKTPGREDTT DDAKAGATSE MAPALVAAFG GKENITNLDA
CITRLRVSVA DVAKVDQAGL KKLGAAGVVV AGSGVQAIFG TKSDNLKTEM DEYIRNS