Gene SeD_A2098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2098 
Symbol 
ID6875374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2020504 
End bp2021154 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content47% 
IMG OID642785208 
Producthypothetical protein 
Protein accessionYP_002215874 
Protein GI198244038 
COG category[R] General function prediction only 
COG ID[COG3443] Predicted periplasmic or secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0742941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.00000151144 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGTGATTC ATTTAAAAAA ACTGACAATG CTTCTGGGAA TGCTGTTGGT CAATAGTCCT 
GCCTTCGCGC ATGGTCATCA TGCTCATGGC GCGCCGATGA CGGAGGTTGA GCAAAAAGCG 
GCAGCGGGCG TGTTTGATGA CGCGAATGTA CGCGATCGCG CGCTCACCGA CTGGGATGGT 
ATGTGGCAAT CCGTCTATCC TTATCTGGTC AGCGGCGAGC TGGACCCTGT CTTCAGACAA 
AAGGCGAAGA AAGACCCGGA GAAAACGTTT GAGGATATTA AAGCGTATTA TCGCAAAGGA 
TACGTGACGA ATGTTGAGAC GATCGGCATT GAAAATGGCG TTATAGAATT CCATCGCGAC 
AATAACGTTG CATCCTGTAA ATACAATTAT GCCGGCTATA AAATTCTGAC TTACGCATCG 
GGTAAAAAAG GGGTGCGCTA CCTGTTCGAA TGTAAAGATG CGAATAGCAA AGCGCCTAAA 
TATGTTCAGT TTAGCGATCA TATCATTGCC CCGCGCAAAT CGGCGCACTT CCATATCTTT 
ATGGGAAATA CCTCGCAGCA GGCATTGTTG CAAGAGATGG AAAACTGGCC TACCTATTAT 
CCTTATCAGT TAAAGGCGAA TGAGGTCGTT GACGAAATGC TACATCATTA A
 
Protein sequence
MVIHLKKLTM LLGMLLVNSP AFAHGHHAHG APMTEVEQKA AAGVFDDANV RDRALTDWDG 
MWQSVYPYLV SGELDPVFRQ KAKKDPEKTF EDIKAYYRKG YVTNVETIGI ENGVIEFHRD 
NNVASCKYNY AGYKILTYAS GKKGVRYLFE CKDANSKAPK YVQFSDHIIA PRKSAHFHIF 
MGNTSQQALL QEMENWPTYY PYQLKANEVV DEMLHH