Gene SeD_A1992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1992 
Symbol 
ID6873516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1924142 
End bp1925428 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content55% 
IMG OID642785108 
Producthypothetical protein 
Protein accessionYP_002215774 
Protein GI198243234 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.594962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.0242177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGATG ATAAATTTGA CGCTATTGTG GTGGGCGCAG GCGTAGCAGG AACGGTCGCC 
GCGTATGTGA TGGCAAAAGC GGGACTGGAT GTACTGGTTA TTGAACGCGG AAACAGCGCG
GGCAGCAAAA ATATGACCGG TGGCCGGCTC TACGCTCACA GTATCGAAAG TATTATGCCG
GGATTCGCAA CGTCCGCCCC CATCGAACGC GTCGTTACCC GTGAAAAAAT CTCCTTTTTA
ACCGAAGAAA GCGCCGTCAC ACTTGATTTT CACCGCGCGC CCCCTACTCC GCCCCTTACG
TCATATACCG TACTGCGCAA CAAACTGGAC CCGTGGTTAA TGGCGCAGGC GGAGCAGGCT
GGCGCGCAGT TTATCCCAGG TGTACGGGTC GACGCTCTGG TACGTGAAGG CAATCGCGTC
ACTGGCGTTC AGGCCGGGGA TGATATTCTT GATGCGAATA TTGTGATTCT CGCGGACGGC
GTGAATTCCA TGCTGGGCCG TTCACTGGAC ATGGTGCCTG CCTCGTCTGC GCATCACTAT
GCCGTCGGCG TAAAAGAGTT GATTGGGCTC TCTCCGGCAC TTATTGAAGA GCGCTTTAAT
CTGGCGTCCC ATGAAGGCGC CGCCTGGTTA TTCGCTGGCG CGCCCTCCAA CGGGCTCATG
GGCGGCGGGT TTCTTTATAC CAACCGCGAT TCGGTTTCTC TGGGGCTGGT ATGTGGCCTG
GGCGACATTG CTCACGCGAC CAAAAGCGTA CCGCAAATGC TGGAAGATTT TAAACAGCAT
CCGGCGATAC GCCCTTTGAT TCAGGGGGGA ACGCTGCTTG AATACTCCGC TCATATGGTG
CCCGAAGGCG GCATAGCAAT GATGCCGGAG CTGGCAAATG ACGGTGTGAT GATTGTCGGC
GACGCCGCCG GTCTTTGTCT GAATCTCGGC TATACCGTCC GCGGCATGGA TTTAGCCATC
GCGTCCGCGC AAGCGGCCGC TCAAACCGCC ATTGACGCTA AAGCGCGGCA AGATTTTTCC
GCCGCGAGTC TTGCCGGTTA CAAACGCGCG CTGGAGAAAA ACGGCGTGTT ACGCGATATG
CGGCATTTCC GCAAACTCCC CGGATTAATG GAAAACCCAC GGCTTTTTAC CGAGTACCCG
CGTATGGCGG CAAACATTGT GGGCGATCTG TTCACCGTTG ATGGCGGTCC AGTCCCACCG
TTGCGTAAAA CTATCCTGTC ACATGCGAAA AAAATTGGAC TGGTGAATCT ATTAAAAGAC
GGCATAAAAG GGGCTACGGC ATTATGA
 
Protein sequence
MSDDKFDAIV VGAGVAGTVA AYVMAKAGLD VLVIERGNSA GSKNMTGGRL YAHSIESIMP 
GFATSAPIER VVTREKISFL TEESAVTLDF HRAPPTPPLT SYTVLRNKLD PWLMAQAEQA
GAQFIPGVRV DALVREGNRV TGVQAGDDIL DANIVILADG VNSMLGRSLD MVPASSAHHY
AVGVKELIGL SPALIEERFN LASHEGAAWL FAGAPSNGLM GGGFLYTNRD SVSLGLVCGL
GDIAHATKSV PQMLEDFKQH PAIRPLIQGG TLLEYSAHMV PEGGIAMMPE LANDGVMIVG
DAAGLCLNLG YTVRGMDLAI ASAQAAAQTA IDAKARQDFS AASLAGYKRA LEKNGVLRDM
RHFRKLPGLM ENPRLFTEYP RMAANIVGDL FTVDGGPVPP LRKTILSHAK KIGLVNLLKD
GIKGATAL