| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1985 |
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| Symbol | aroD |
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| ID | 6872442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 1917569 |
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| End bp | 1918327 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642785101 |
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| Product | 3-dehydroquinate dehydratase |
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| Protein accession | YP_002215767 |
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| Protein GI | 198243639 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0710] 3-dehydroquinate dehydratase |
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| TIGRFAM ID | [TIGR01093] 3-dehydroquinate dehydratase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.000267854 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAAACCG TAACTGTAAG AGATCTCGTG GTTGGCGAAG GCGCGCCAAA GATCATTGTG
TCGCTAATGG GAAAAACCAT TACCGATGTG AAATCGGAAG CACTCGCCTA CCGTGAAGCG
GATTTCGATA TTCTGGAGTG GCGCGTTGAC CATTTTGCCA ACGTGACAAC GGCGGAAAGC
GTACTTGAGG CCGCCGGCGC CATCCGGGAG ATTATCACCG ATAAACCCTT GCTATTTACC
TTCCGCAGCG CGAAAGAAGG CGGCGAACAG GCGCTAACCA CCGGACAGTA TATCGCTCTG
AATCGTGCAG CGGTTGACAG CGGTCTGGTC GATATGATCG ATCTTGAGCT TTTTACCGGC
GACGATGAGG TGAAAGCCAC CGTCGGCTAT GCTCATCAAC ACAATGTTGC GGTGATCATG
TCTAACCATG ATTTTCATAA AACGCCCGCA GCGGAAGAGA TTGTTCAGCG TCTGCGTAAA
ATGCAGGAAC TGGGCGCCGA TATTCCGAAG ATCGCCGTCA TGCCGCAGAC TAAAGCCGAT
GTCCTGACCT TACTTACCGC CACTGTAGAA ATGCAGGAGC GCTATGCGGA TCGTCCGATT
ATTACCATGT CGATGTCGAA AACCGGGGTA ATATCTCGTC TTGCCGGCGA AGTGTTCGGT
TCTGCAGCAA CGTTTGGCGC GGTGAAAAAA GCATCTGCGC CGGGACAAAT ATCAGTAGCC
GATCTGCGTA CCGTATTAAC TATATTGCAC CAGGCGTAA
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| Protein sequence | MKTVTVRDLV VGEGAPKIIV SLMGKTITDV KSEALAYREA DFDILEWRVD HFANVTTAES
VLEAAGAIRE IITDKPLLFT FRSAKEGGEQ ALTTGQYIAL NRAAVDSGLV DMIDLELFTG
DDEVKATVGY AHQHNVAVIM SNHDFHKTPA AEEIVQRLRK MQELGADIPK IAVMPQTKAD
VLTLLTATVE MQERYADRPI ITMSMSKTGV ISRLAGEVFG SAATFGAVKK ASAPGQISVA
DLRTVLTILH QA
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