Gene SeD_A1977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1977 
Symbol 
ID6875611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1908046 
End bp1908456 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content57% 
IMG OID642785094 
Producthypothetical protein 
Protein accessionYP_002215760 
Protein GI198243641 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.000000333806 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGATCTGGA AACGTGAAGT GACCCTCGAT GCGCTTAATG CGATGGGGGA AGGAAATATG 
GTTGGCCTGC TTGATATCCG CTTTGAGCGT ATTGGGGACG ATACGCTGGA AGCGACAATG
CCCGTCGATC ATCGCACCAA ACAGCCGTTC GGCTTGCTGC ATGGCGGAGC GTCTGTGGTG
CTGGCGGAAA GTATCGGCTC GGTCGCAGGT TATCTGTGTA CGCAGGGGGA GCAAAAGGTG
GTGGGGCTGG AGGTGAATGC CAACCATGTA CGGTCGGCGC GTCAGGGGCG CGTACGAGGC
GTCTGTAAAG CGTTGCATAC CGGGGCTCGC CATCAGGTCT GGCAGATAGA GATCTTTGAT
GAACAGGGAC GTCTGTGCTG TTCTTCGCGT CTTACTACGG CGATTGTGTG A
 
Protein sequence
MIWKREVTLD ALNAMGEGNM VGLLDIRFER IGDDTLEATM PVDHRTKQPF GLLHGGASVV 
LAESIGSVAG YLCTQGEQKV VGLEVNANHV RSARQGRVRG VCKALHTGAR HQVWQIEIFD
EQGRLCCSSR LTTAIV