Gene SeD_A1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1965 
Symbollpp 
ID6873159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1898396 
End bp1898632 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content51% 
IMG OID642785084 
Productmajor outer membrane lipoprotein 
Protein accessionYP_002215750 
Protein GI198244273 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4238] Murein lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.00000537115 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.000000000167771 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAATCGTA CTAAACTGGT ACTGGGCGCG GTAATCCTGG GTTCTACTCT GCTGGCTGGT 
TGCTCCAGCA ACGCTAAAAT CGATCAGCTG TCTTCTGACG TTCAGACTCT GAACGCTAAA 
GTTGACCAGC TGAGCAACGA CGTGAACGCA ATGCGTTCCG ACGTTCAGGC TGCTAAAGAC 
GACGCAGCTC GCGCTAACCA GCGTCTGGAC AACCAGGCTA CTAAATACCG TAAGTAA
 
Protein sequence
MNRTKLVLGA VILGSTLLAG CSSNAKIDQL SSDVQTLNAK VDQLSNDVNA MRSDVQAAKD 
DAARANQRLD NQATKYRK