Gene SeD_A1916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1916 
Symbolcfa 
ID6874292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1852665 
End bp1853813 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content49% 
IMG OID642785039 
Productcyclopropane fatty acyl phospholipid synthase 
Protein accessionYP_002215707 
Protein GI198244094 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0810656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCAT CGTGTATAGA AGAAGTCAGC GTACCGGATG ATAACTGGTA CCGAATCGCC 
AACGAATTGT TAAGTCGCGC GGATATTACA ATTAATGGTT CCGCCCCGTC TGACATTCGT
GTTAAGAATC CCGATTTTTT TAAACGCGTC CTTCAGGAAG GATCGTTGGG GTTAGGTGAG
AGTTACATGG ATGGCTGGTG GGAATGCGAG CGTCTGGATA TTTTCTTCAG CAAAGTCTTA
CGTGCCGGTC TTGAAAATCA ACTCCCCCAC CATGTTAAAG ATACGCTCCG TATCCTCGGC
GCGCGTCTGA TTAATCTACA AAGTAAAAAA CGCGCCTGGA TTGTCGGCAA GGAACATTAC
GATCTTGGTA ATGACCTTTT TTCCCGTATG CTCGATCCCT ATATGCAATA TTCTTGCGCC
TACTGGAAAG ATGCCGATAC GCTGGAAGCG GCACAGCAAG CCAAGCTGAA ATTAATTTGC
GAAAAGCTAC AGCTACAACC GGGGATGCGT GTGCTGGATA TCGGCTGCGG CTGGGGCGGT
CTGTCGCAAT ATATGGCGAC CCATTATGGC GTTAGCGTGG TGGGCGTAAC GATCTCCGCT
GAACAACAAA AAATGGCGCA GACGCGTTGC GAAGGTCTGG ATGTCTCCAT TCTCCTGGAA
GATTATCGCG ACCTTAACGA TCAGTTTGAC CGAATCGTCT CCGTCGGCAT GTTCGAACAT
GTCGGGCCAA AAAACTACAA CACCTATTTT GAGGTCGTTG ACAGGAATTT AAAACCGGAT
GGTCTTTTCC TGCTCCATAC TATTGGTTCT AAAAAAACCG ATCATAATGT CGATCCGTGG
ATCAATAAGT ATATTTTCCC CAACGGTTGT TTGCCGTCTG TTCGTCAAAT CGCCGAGGCC
AGCGAATCAC ACTTTGTAAT GGAAGACTGG CATAACTTTG GCGCCGACTA TGACACGACT
CTGATGGCGT GGCATGAGCG CTTTATCAAT GCCTGGCCAG AGATTGCGGG CAATTATAAC
GAGCGCTTTA AACGTATGTT CAGCTATTAT CTCAACGCCT GCGCGGGTGC GTTTCGCGCG
CGTGATATCC AGCTTTGGCA GGTGGTATTT ACGCGCGGCG TTGAAAACGG ACTGCGCGTT
CCTCGCTAA
 
Protein sequence
MSSSCIEEVS VPDDNWYRIA NELLSRADIT INGSAPSDIR VKNPDFFKRV LQEGSLGLGE 
SYMDGWWECE RLDIFFSKVL RAGLENQLPH HVKDTLRILG ARLINLQSKK RAWIVGKEHY
DLGNDLFSRM LDPYMQYSCA YWKDADTLEA AQQAKLKLIC EKLQLQPGMR VLDIGCGWGG
LSQYMATHYG VSVVGVTISA EQQKMAQTRC EGLDVSILLE DYRDLNDQFD RIVSVGMFEH
VGPKNYNTYF EVVDRNLKPD GLFLLHTIGS KKTDHNVDPW INKYIFPNGC LPSVRQIAEA
SESHFVMEDW HNFGADYDTT LMAWHERFIN AWPEIAGNYN ERFKRMFSYY LNACAGAFRA
RDIQLWQVVF TRGVENGLRV PR