Gene SeD_A1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1906 
Symbol 
ID6873865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1843367 
End bp1843966 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content56% 
IMG OID642785029 
ProductTetR family transcriptional regulator 
Protein accessionYP_002215697 
Protein GI198243753 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones93 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGC AAACCGAACA CGATACCCGC GAACATCTGC TGGCCACCGG CGAGCAGCTT 
TGTATGCAAC GGGGTTTTAC CGGCATGGGG CTTAGCGAGT TGCTCAAAAC CGCCCAGGTG
CCTAAAGGGT CGTTTTATCA CTACTTTCGC TCGAAAGAAG CCTTCGGCGT CGCCATGCTT
GAGCGACATT ACGCCTGCTA TCATCAGCGT CTTACGGCGC ACTTCACCTC CGGTCCCGGT
AATCATCGCG ATCGTCTTCT CGCCTGGTAT CAGGAAACGT TAAAGCAGTT TTGCCAGCAA
GGCGCCATCA GCGGTTGCCT GACGGTGAAA CTGTCAGCGG AGGTCTGCGA TCTGTCGGAG
GATATGCGCT CTACGATGGA TAAAGGGGCG CAGGAGATCA TGGCACTGCT TGCACGCGCG
CTGGAAGATG GCCGTAATAG CCACTGTTTA CATTTCACCG GCCAGCCGTT GCCACAGGCG
CAGGTACTTT ATGCTCTGTG GCTGGGCGCC AATTTGCAGG CCAAAATATC CCGTAGCGCC
GCGCCGCTGG AAAATGCGTT GGCGCATGTT AAGACCATCA TTGCAACGCC TGAGCAGTAA
 
Protein sequence
MNKQTEHDTR EHLLATGEQL CMQRGFTGMG LSELLKTAQV PKGSFYHYFR SKEAFGVAML 
ERHYACYHQR LTAHFTSGPG NHRDRLLAWY QETLKQFCQQ GAISGCLTVK LSAEVCDLSE
DMRSTMDKGA QEIMALLARA LEDGRNSHCL HFTGQPLPQA QVLYALWLGA NLQAKISRSA
APLENALAHV KTIIATPEQ