Gene SeD_A1899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1899 
Symbol 
ID6872880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1837721 
End bp1838161 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content49% 
IMG OID642785022 
Producttranscriptional regulator SlyA 
Protein accessionYP_002215690 
Protein GI198243021 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0947823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGG AATCGCCACT AGGTTCTGAT CTGGCACGGT TGGTGCGCAT TTGGCGTGCT 
CTGATTGACC ATCGCCTCAA GCCTCTGGAA TTGACGCAGA CACATTGGGT CACGTTGCAC 
AATATTCATC AATTGCCGCC TGACCAGTCG CAGATTCAAT TGGCTAAAGC GATAGGCATT 
GAGCAGCCAT CGCTGGTACG CACGTTGGAT CAACTTGAAG ATAAGGGGCT AATTTCGCGG 
CAAACCTGCG CCAGCGATCG TCGCGCTAAG CGGATTAAAC TGACCGAAAA AGCGGAGCCG 
CTGATCGCTG AGATGGAAGA GGTCATTCAT AAAACGCGCG GTGAAATTTT GGCTGGGATT 
TCTTCAGAGG AGATTGAGCT TCTGATTAAA CTTATCGCCA AACTTGAACA CAATATTATG 
GAATTGCACT CTCACGATTG A
 
Protein sequence
MKLESPLGSD LARLVRIWRA LIDHRLKPLE LTQTHWVTLH NIHQLPPDQS QIQLAKAIGI 
EQPSLVRTLD QLEDKGLISR QTCASDRRAK RIKLTEKAEP LIAEMEEVIH KTRGEILAGI 
SSEEIELLIK LIAKLEHNIM ELHSHD