Gene SeD_A1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1889 
Symbolnth 
ID6875082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1828849 
End bp1829484 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content53% 
IMG OID642785014 
Productendonuclease III 
Protein accessionYP_002215682 
Protein GI198242866 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAG CAAAAAGGCT GGAAATTCTG ACGCGCCTGC GCGACAGCAA CCCGCACCCC 
ACAACGGAAC TCAATTTCAC GTCGCCATTT GAGTTGCTGA TTGCCGTGTT GCTTTCCGCG
CAGGCAACCG ACGTCAGCGT GAACAAGGCT ACCGCCAAAC TTTACCCGGT CGCCAATACG
CCAGCCGCGA TGCTGGAGCT GGGCGTAGAG GGCGTGAAAT CCTATATCAA AACTATCGGC
TTATTTAACA GTAAAGCGGA AAACGTGGTT AAGACCTGCC GTATTTTACT GGACAAGCAT
AATGGCGAAG TGCCGGAGGA TCGGGCGGCG CTGGAAGCGC TTCCCGGCGT GGGGCGTAAA
ACCGCTAACG TGGTGCTAAA TACCGCCTTC GGCTGGCCGA CCATCGCCGT TGATACGCAT
ATATTTCGTG TATGCAACCG AACGCAGTTC GCGCCGGGTA AAAATGTCGA GCAGGTAGAA
GAGAAGTTGC TGAAAGTGGT GCCGAATGAG TTCAAAGTGG ACTGCCATCA CTGGTTAATT
TTGCATGGTC GCTATACCTG TATCGCCCGA AAACCCCGCT GCGGCTCCTG CCTCATTGAA
GACCTTTGCG AATACAAAGA AAAAGTCGAT ATTTGA
 
Protein sequence
MNKAKRLEIL TRLRDSNPHP TTELNFTSPF ELLIAVLLSA QATDVSVNKA TAKLYPVANT 
PAAMLELGVE GVKSYIKTIG LFNSKAENVV KTCRILLDKH NGEVPEDRAA LEALPGVGRK
TANVVLNTAF GWPTIAVDTH IFRVCNRTQF APGKNVEQVE EKLLKVVPNE FKVDCHHWLI
LHGRYTCIAR KPRCGSCLIE DLCEYKEKVD I