Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1889 |
Symbol | nth |
ID | 6875082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 1828849 |
End bp | 1829484 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642785014 |
Product | endonuclease III |
Protein accession | YP_002215682 |
Protein GI | 198242866 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAG CAAAAAGGCT GGAAATTCTG ACGCGCCTGC GCGACAGCAA CCCGCACCCC ACAACGGAAC TCAATTTCAC GTCGCCATTT GAGTTGCTGA TTGCCGTGTT GCTTTCCGCG CAGGCAACCG ACGTCAGCGT GAACAAGGCT ACCGCCAAAC TTTACCCGGT CGCCAATACG CCAGCCGCGA TGCTGGAGCT GGGCGTAGAG GGCGTGAAAT CCTATATCAA AACTATCGGC TTATTTAACA GTAAAGCGGA AAACGTGGTT AAGACCTGCC GTATTTTACT GGACAAGCAT AATGGCGAAG TGCCGGAGGA TCGGGCGGCG CTGGAAGCGC TTCCCGGCGT GGGGCGTAAA ACCGCTAACG TGGTGCTAAA TACCGCCTTC GGCTGGCCGA CCATCGCCGT TGATACGCAT ATATTTCGTG TATGCAACCG AACGCAGTTC GCGCCGGGTA AAAATGTCGA GCAGGTAGAA GAGAAGTTGC TGAAAGTGGT GCCGAATGAG TTCAAAGTGG ACTGCCATCA CTGGTTAATT TTGCATGGTC GCTATACCTG TATCGCCCGA AAACCCCGCT GCGGCTCCTG CCTCATTGAA GACCTTTGCG AATACAAAGA AAAAGTCGAT ATTTGA
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Protein sequence | MNKAKRLEIL TRLRDSNPHP TTELNFTSPF ELLIAVLLSA QATDVSVNKA TAKLYPVANT PAAMLELGVE GVKSYIKTIG LFNSKAENVV KTCRILLDKH NGEVPEDRAA LEALPGVGRK TANVVLNTAF GWPTIAVDTH IFRVCNRTQF APGKNVEQVE EKLLKVVPNE FKVDCHHWLI LHGRYTCIAR KPRCGSCLIE DLCEYKEKVD I
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