Gene SeD_A1882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1882 
Symbol 
ID6874392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1822655 
End bp1823128 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content51% 
IMG OID642785007 
Productinner membrane protein YdgK 
Protein accessionYP_002215675 
Protein GI198245617 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTA ATGCGCGTAA CCCCGGAGAA GATATGACTA CAACACCGCC ACAACGAATT 
GGAGGCTGGC TTCTTGGCCC GTTAGCCTGG CTGTTAGTCG CGTTGTTGAG CGCCTCGCTG 
GCGTTATTAC TCTACGTTAT GGCGCTTGCC ACACCGCAAA CGTTCAAGAC GCTTAGCGGA 
CAGGAAACCG GTAATTTACT GCTATGGGGC ATTTCATTTA TTACCGCTAT CGCCATGTGG 
TACTATACCC TGTGGTTGAC GATCGCATTC TTCAAGCGCA GACGCTGCGT GCCGAAGCAT 
TACATTATCT GGCTGCTGGT GTCGGTGTTA CTGGCGGTTA AAGCATTTGC CTTTTCGCCC 
GTCTCAGATG CCTTTGCCGT GCGTCAGTTA CTCTTCCCAC TGTTGGCGAC GGCGCTCATT 
GTGCCTTATC TCAAACGTTC AGCGCGCGTT AAAACAACGT TTGTTAATCC GTAA
 
Protein sequence
MTVNARNPGE DMTTTPPQRI GGWLLGPLAW LLVALLSASL ALLLYVMALA TPQTFKTLSG 
QETGNLLLWG ISFITAIAMW YYTLWLTIAF FKRRRCVPKH YIIWLLVSVL LAVKAFAFSP 
VSDAFAVRQL LFPLLATALI VPYLKRSARV KTTFVNP