Gene SeD_A1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1857 
Symbol 
ID6875617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1797171 
End bp1797500 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content56% 
IMG OID642784987 
Productmultidrug efflux system protein MdtI 
Protein accessionYP_002215655 
Protein GI198244430 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.915726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACAAT TTGAATGGAT ACACGGCGCC TGGCTTGGGC TGGCAATAAT GCTGGAAATC 
GCGGCTAACG TACTGTTGAA ATTTTCGGAC GGCTTTCGCC GTAAATGCTA TGGCATCTTA
TCGCTTGCCG CTGTTCTGGC CGCCTTCAGC GCGCTTTCCC AGGCGGTAAA AGGGATAGAC
CTGTCGGTGG CGTATGCGTT ATGGGGCGGT TTTGGTATTG CCGCCACGCT GGCGGCGGGC
TGGGTGCTCT TCGGCCAGCG CTTAAACCCC AAAGGCTGGG TTGGCGTGAT ATTGCTGCTC
GCCGGAATGG TCATGATCAA ATTTGCCTGA
 
Protein sequence
MQQFEWIHGA WLGLAIMLEI AANVLLKFSD GFRRKCYGIL SLAAVLAAFS ALSQAVKGID 
LSVAYALWGG FGIAATLAAG WVLFGQRLNP KGWVGVILLL AGMVMIKFA