Gene SeD_A1850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1850 
SymbolbioD2 
ID6875701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1790957 
End bp1791652 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content52% 
IMG OID642784980 
Productputative dithiobiotin synthetase 
Protein accessionYP_002215648 
Protein GI198244304 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0132] Dethiobiotin synthetase 
TIGRFAM ID[TIGR00347] dethiobiotin synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGC GTTTCTTTAT TACAGGTACA GACACTTCTG TTGGGAAGAC GGTGGTTTCC 
CGCGCATTAC TACAAGCGTT AGCGTCGAGT GGTAAGAGCG TTGCAGGGTA TAAACCTGTC
GCTAAAGGGA GCAAAGAGAC TGCAGAAGGG ATGCGCAACA AAGATGCGCT GGTATTGCAA
AGCGTCTCTT CGCTGGAGTT GCCGTATGAG GCGATTAATC CGATCGCGTT AAGCGAAGAA
GAAAGCAGCG TCGCGCATAG CTGTCCTATA AATTACACCT TGCTGTCCAA CGGTCTGGCG
AGCCTGAGCG ATAAAGTGGA CCACGTTGTT GTGGAGGGCA CTGGTGGCTG GCGTAGTTTG
ATGAATGATT TACGTCCATT GTCTGAATGG GTGGTACAGG AACAGTTACC GGTATTGATG
GTGGTAGGGA TTCAGGAGGG GTGCATTAAT CATGCGCTAC TGACTGCGCA AGCTGTCGCT
AATGATGGAC TGCCCTTAAT TGGCTGGGTG GCGAATCGTA TCAATCCTGG CCTGGCGCAT
TATGCTGAAA TTATTGATGT GCTTGGGAAA AAACTGCCAG CGCCGCTGAT TGGCGAGCTA
CCGTACCTGC CGCGCGCCGA GCAGCGTGAG CTGGGGCAGT ATATTCGTTT GTCAATGCTC
GGCAGCGTGC TGGCGGTAGA TAGAATCATG GCGTAA
 
Protein sequence
MLKRFFITGT DTSVGKTVVS RALLQALASS GKSVAGYKPV AKGSKETAEG MRNKDALVLQ 
SVSSLELPYE AINPIALSEE ESSVAHSCPI NYTLLSNGLA SLSDKVDHVV VEGTGGWRSL
MNDLRPLSEW VVQEQLPVLM VVGIQEGCIN HALLTAQAVA NDGLPLIGWV ANRINPGLAH
YAEIIDVLGK KLPAPLIGEL PYLPRAEQRE LGQYIRLSML GSVLAVDRIM A