| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1826 |
|---|
| Symbol | |
|---|
| ID | 6872844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 1768551 |
|---|
| End bp | 1769297 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642784958 |
|---|
| Product | 3-hydroxy acid dehydrogenase |
|---|
| Protein accession | YP_002215626 |
|---|
| Protein GI | 198245020 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0315451 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 95 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTTT TAGTAACTGG AGCAACCGCA GGGTTTGGCG AGTGCATTGC ACGCCGTTTT
GTTGAGAATG GACATAAAGT CATTGCCACG GGACGTCGTC ATGAACGCCT GCAAGCGTTA
AAAGATGAGC TTGGCGAGAA CGTATTGACC GCCCAACTGG ACGTGCGCAA CCGCGCGGCC
ATCGAAGAGA TGATGGCCTC TCTGCCTGCG CAGTGGCGCG ATATTGATGT GCTGGTCAAT
AACGCCGGTC TGGCGCTGGG TCTTGAACCG GCGCATAAAG CCAGCGTAGA AGACTGGGAA
ACTATGATCG ATACTAATAA TAAAGGCTTA ATTTATATGA CCCGCGCCGT GCTGCCAGGA
ATGGTCGAAC GTAATCGCGG TCATATCATT AACATCGGTT CAACCGCCGG CAGTTGGCCT
TATGCTGGTG GCAACGTCTA TGGCGCGACG AAAGCCTTTG TGCGCCAGTT TAGCCTGAAT
TTGCGCACGG ATTTACACGG CACGGCGGTT CGCGTGACCG ACATTGAACC GGGCCTGGTT
GGCGGTACCG AGTTTTCCAG CGTCCGTTTC AAAGGCGACG ATGAGAAAGC GGGTAAAACC
TACGAAAATA CCACCGCGCT CACGCCAGAA GACATTACCG AAGCGGTATG GTGGGTGGCC
ACACTCCCCG CGCATGTGAA TATTAATACC GTTGAAATGA TGCCTGTTAC CCAATCTTTC
GCAGGGCTCA GCGTCCACCG TAGCTAA
|
|---|
| Protein sequence | MIVLVTGATA GFGECIARRF VENGHKVIAT GRRHERLQAL KDELGENVLT AQLDVRNRAA
IEEMMASLPA QWRDIDVLVN NAGLALGLEP AHKASVEDWE TMIDTNNKGL IYMTRAVLPG
MVERNRGHII NIGSTAGSWP YAGGNVYGAT KAFVRQFSLN LRTDLHGTAV RVTDIEPGLV
GGTEFSSVRF KGDDEKAGKT YENTTALTPE DITEAVWWVA TLPAHVNINT VEMMPVTQSF
AGLSVHRS
|
|---|
| |