Gene SeD_A1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1726 
Symbol 
ID6872991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1662633 
End bp1663070 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content57% 
IMG OID642784863 
ProductPTS system phosphoenolpyruvate-dependent sugar transproter subunit EIIA 
Protein accessionYP_002215531 
Protein GI198242304 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.861795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.314474 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAATG ATGTTAAGTG GGTTCAGGCG CAACGCCATG CCAGCGACTG GCGACACGCG 
CTGGATATCG CCGTTCGTCC GCTGATTACG TTCGGCGCGG CGGCCCCCTG CTACCTGGAC
GGTATTATTG AGAACACCCT TAAATGGGGG CCATATTATC TTATCGCGCC GGGGATTGCG
CTGCCCCATG CCAGACCAGA GCAAGGCGCT AACCATAATC AAATCAGCGT CACTACGTTA
GCAACGCCGG TCGCTTTCGG TAATGCGGAT TGCGATCCCA TCTGGCTGTT GCTTTGCGCC
AGCGCCACGG ATGCCGAAGC ACATATTCGC ACCATTCAAC GCATCAGCCA GTGGCTCGAC
TCGCCGGAAA GCGTCGCGAT GCTGCAAGAT GCGCCAAATG ATGCCGCGCT TTTCGCGCAA
TTAACCGCAT TGCGCTGA
 
Protein sequence
MINDVKWVQA QRHASDWRHA LDIAVRPLIT FGAAAPCYLD GIIENTLKWG PYYLIAPGIA 
LPHARPEQGA NHNQISVTTL ATPVAFGNAD CDPIWLLLCA SATDAEAHIR TIQRISQWLD
SPESVAMLQD APNDAALFAQ LTALR