| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1636 |
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| Symbol | sapF |
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| ID | 6875321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1579639 |
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| End bp | 1580445 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642784780 |
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| Product | peptide ABC transporter ATP-binding protein SapF |
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| Protein accession | YP_002215448 |
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| Protein GI | 198245279 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4167] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.55489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00000000158294 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTGGAAA CTCTGCTTGA AGTGCGCAAC CTGAGTAAAA CCTTTCGCTA CCGGACAGGA
TGGTTTCGCC GCCAGACCGT CGACGCCGTG AAACCATTAA GCTTTACGCT TCGTGAGCGT
CAGACCCTGG CCATTATCGG CGAAAACGGT TCCGGCAAAT CCACGCTGGC AAAGATGCTG
GCCGGCATGA TTGAACCCAC CAGCGGCGAG CTTCTTATTG ACGATCATCC CCTGCATTAC
GGCGACTATT CGTTTCGAAG CCAACGTATT CGAATGATTT TTCAGGACCC CTCAACGTCA
CTGAATCCAC GTCAACGTAT TTCGCAGATC CTTGACTTCC CCCTGCGCCT TAATACCGAT
CTGGAGCCGG AACAGCGGCG CAAACAGATT GTCGAGACGA TGCGTATGGT GGGGCTATTG
CCCGATCACG TGAGCTACTA CCCGCATATG CTGGCGCCGG GGCAGAAACA GCGTCTGGGC
CTGGCCCGCG CGCTGATTTT ACGCCCTAAA GTCATTATCG CGGACGAAGC GCTGGCTTCG
CTTGATATGT CCATGCGCTC GCAGCTCATC AATCTGATGC TTGAATTGCA GGAAAAGCAA
GGCATCTCCT ATATCTATGT CACGCAGCAT ATCGGCATGA TGAAGCATAT TAGCGATCAG
GTATTAGTGA TGCATCAGGG GGAAGTGGTT GAACGCGGCA GCACCGCCGA TGTGCTCGCC
TCTCCGCTAC ATGAGCTTAC CCGCCGTTTA ATCGCAGGCC ATTTTGGCGA GGCGCTGACC
GCTGACGCAT GGCGAAAGGA TCGCTAA
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| Protein sequence | MVETLLEVRN LSKTFRYRTG WFRRQTVDAV KPLSFTLRER QTLAIIGENG SGKSTLAKML
AGMIEPTSGE LLIDDHPLHY GDYSFRSQRI RMIFQDPSTS LNPRQRISQI LDFPLRLNTD
LEPEQRRKQI VETMRMVGLL PDHVSYYPHM LAPGQKQRLG LARALILRPK VIIADEALAS
LDMSMRSQLI NLMLELQEKQ GISYIYVTQH IGMMKHISDQ VLVMHQGEVV ERGSTADVLA
SPLHELTRRL IAGHFGEALT ADAWRKDR
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