| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1622 |
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| Symbol | |
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| ID | 6874134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 1565923 |
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| End bp | 1567092 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642784767 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_002215435 |
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| Protein GI | 198242977 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000649442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 2.66656e-22 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTGGAGT TGTTATTTCT GCTGTTGCCT GTAGCCGCTG CCTATGGGTG GTATATGGGT
CGCAGAAGTG CGCAACAAAC AAAACAGGAT GAAGCTAACC GCCTGTCGCG CGATTATGTC
GCAGGGGTTA ACTTCCTGCT GAGTAACCAA CAAGATAAAG CGGTGGATCT GTTCCTCGAT
ATGCTTAAAG AGGATACGGG CACCGTTGAG GCTCATCTCA CTCTCGGTAA TCTGTTTCGC
TCTCGCGGCG AAGTCGATCG CGCCATTCGT ATTCATCAAA CGCTCATGGA AAGCGCTTCA
TTGACCTATG AACAGCGTTT ACTGGCTGTT CAGCAACTGG GGCGCGACTA TATGGCCGCC
GGTTTATATG ACCGCGCGGA AGATATGTTT AACCAACTTA CCGACGAAAC GGAATTTCGC
GTAGGCGCGT TACAGCAGCT CTTGCAAATC TATCAGCTAA CCAGCGACTG GCAAAAGGCG
ATCGAAGTAG CAGAACGGCT GGTGAAGCTG GGCAAAGATA AACAACGTAT CGAAATCGCC
CATTTTTACT GTGAGTTAGC GTTACAGCAG ATGGGCAACG ACGACATGGA TCGCGCGATG
GCGTTGCTGA AAAAAGGTGC CGCCGCAGAT AAAAATAGCG CCCGGGTGTC TATCATGATG
GGGCGCGTTT ATATGGCGAG AGGGGATTAC GCCAAAGCGG TCGAAAGCCT GCAACGTGTG
ATCGTTCAGG ATAAAGAGCT GGTCAGCGAA ACGCTGGAGA TGCTGCAAAC CTGTTATCAA
CAGCTCGGTA AAAATGCCGA GTGGGCGGAG TTTTTACGTC GCGCCGTTGA GGAGAATACC
GGTGCTGGCG CTGAGTTAAT GCTTGCCGAT ATTCTGGAAG CGCGTGAAGG TAGTGACGCA
GCTCAAGTCT ATATCACGCG TCAGCTACAG CGACATCCTA CCATGCGGGT GTTCCATAAG
CTGATGGATT ACCATCTCAA CGAGGCGGAA GAAGGGCGAG CGAAAGAAAG CCTGATGGTA
CTGCGTGATA TGGTTGGCGA GCAGGTGCGC AGTAAACCGC GGTATCGTTG TCAGAAATGC
GGTTTTACCG CCTATACCTT GTACTGGCAC TGTCCGTCCT GCCGGGCATG GTCGACCATT
AAACCTATTC GCGGACTTGA TGGGCAGTAG
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| Protein sequence | MLELLFLLLP VAAAYGWYMG RRSAQQTKQD EANRLSRDYV AGVNFLLSNQ QDKAVDLFLD
MLKEDTGTVE AHLTLGNLFR SRGEVDRAIR IHQTLMESAS LTYEQRLLAV QQLGRDYMAA
GLYDRAEDMF NQLTDETEFR VGALQQLLQI YQLTSDWQKA IEVAERLVKL GKDKQRIEIA
HFYCELALQQ MGNDDMDRAM ALLKKGAAAD KNSARVSIMM GRVYMARGDY AKAVESLQRV
IVQDKELVSE TLEMLQTCYQ QLGKNAEWAE FLRRAVEENT GAGAELMLAD ILEAREGSDA
AQVYITRQLQ RHPTMRVFHK LMDYHLNEAE EGRAKESLMV LRDMVGEQVR SKPRYRCQKC
GFTAYTLYWH CPSCRAWSTI KPIRGLDGQ
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