Gene SeD_A1522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1522 
SymboltreA 
ID6874885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1470925 
End bp1472637 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content55% 
IMG OID642784674 
Producttrehalase 
Protein accessionYP_002215344 
Protein GI198244089 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1626] Neutral trehalase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCCC CAGAGATTCG CCGTTCTGTT CTACTACAGA AAGCCATAAA ACTGGCGCTG 
GCAGGGACGC TGCTGACGTT TGCATCGTTT TCGGCGACTG CCGCAGACCC GTCTTCCGAC
ACTGAAACTC CGCAGCCGCC GGATATTTTG CTTGGCCCGC TCTTTAATGA TGTCCAGAAT
GCAAAACTCT TCCCCGATCA GAAAACCTTT GCTGACGCCA TACCTAATAG CGATCCGCTC
ATGATTCTTG CGGATTATCG TATGCAGCGG AACCAGTCCG GCTTCGATTT GCGTCATTTT
GTTGATGTTA ACTTCACCCT GCCGAAAGCG GGTGAAAAAT ATGTCCCGCC TGCCGGGCAG
TCATTGCGTG AACATATTGA TGGCCTGTGG CCGGTGCTGA CCCGTTCAAC TAAAAACGTC
GAAAAGTGGG ACTCGCTCTT GCCGTTGCCT GAATCCTATG TCGTACCGGG TGGGCGATTC
AGAGAGATTT ACTACTGGGA CAGCTATTTT ACGATGCTGG GGCTGGCGGA AAGCGGGCAC
TGGGATAAGG TGGCGGATAT GGTAGCGAAC TTTGGTTACG AAATTGACGC CTGGGGGCAT
ATTCCTAACG GCAACCGTAC CTACTACCTG AGTCGTTCGC AGCCGCCTTT CTTTGCGTTT
ATGGTTGAGT TACTGGCGCA ACATGAAGGT GACGATGCGC TGAAAGAATA CCTGCCGCAA
CTGCAAAAAG AGTACGCCTA CTGGATGGAG GGCGTTGAGA CATTGCAGCC AGGGCAACAA
AACCAACGCG TCGTCAAACT GGAAGACGGT AGCGTTCTCA ACCGCTACTG GGACGATCGG
GATACGCCCC GCCCTGAATC CTGGGTTGAA GATATCGCTA CCGTCAAAAG CAACCCCAAC
CGCCCGGCAA CGGAGATCTA TCGGGACCTC CGTTCTGCTG CCGCCTCCGG CTGGGATTTC
AGCTCCCGCT GGATGGATAA TCCGCAGCAG CTCAGTACCA TTCGTACCAC CACTATTGTC
CCTGTCGATC TTAACGCTCT GCTGTATCAG CTGGAGAAAA CCCTCGCCCG CGCCAGCGCT
GCGGCGGGCG ATCGGGCCAA AGCCTCGCAC TATGACGCGC TGGCCAACGC GCGGCAAAAA
GCCATTGAAA TGCATCTGTG GAATAACAAA GAGGGTTGGT ATGCCGACTA CGATCTGAAG
AACAATAAAA TCCGTGACCA ACTCACCGCT GCCGCGCTGT TCCCGCTCTA TGTAAACGCC
GCCGCGAAAG ATCGCGCCGC GAAAGTGGCG GCGGCGGCCC AGGCGCATCT GCTACAGCCT
GGCGGGCTGG CTACCACCTC GGTTAAAAGC GGACAGCAAT GGGATGCGCC AAACGGCTGG
GCGCCGTTAC AATGGGTCGC TGCCGAAGGA TTGCAAAATT ATGGGCAGGA TGACGTGGCA
ATGGAAGTCA CCTGGCGCTT TTTAACCAAT GTGCAGCACA CCTACGATCG CGAGAAAAAA
CTGGTCGAAA AATATGACGT CAGCAGCACC GGAACCGGCG GTGGCGGCGG CGAATATCCA
CTTCAGGACG GCTTTGGCTG GACCAACGGC GTGACGCTGA AAATGCTCGA TCTGATTTGT
CCGCAGGAAA AACCGTGCGA TAGCGTACCG TCTACTCGTC CGGCATCGTT AAGCGCAACG
CCGACAAAAA CGCCGTCTGC AGCGACGCAG TAA
 
Protein sequence
MIPPEIRRSV LLQKAIKLAL AGTLLTFASF SATAADPSSD TETPQPPDIL LGPLFNDVQN 
AKLFPDQKTF ADAIPNSDPL MILADYRMQR NQSGFDLRHF VDVNFTLPKA GEKYVPPAGQ
SLREHIDGLW PVLTRSTKNV EKWDSLLPLP ESYVVPGGRF REIYYWDSYF TMLGLAESGH
WDKVADMVAN FGYEIDAWGH IPNGNRTYYL SRSQPPFFAF MVELLAQHEG DDALKEYLPQ
LQKEYAYWME GVETLQPGQQ NQRVVKLEDG SVLNRYWDDR DTPRPESWVE DIATVKSNPN
RPATEIYRDL RSAAASGWDF SSRWMDNPQQ LSTIRTTTIV PVDLNALLYQ LEKTLARASA
AAGDRAKASH YDALANARQK AIEMHLWNNK EGWYADYDLK NNKIRDQLTA AALFPLYVNA
AAKDRAAKVA AAAQAHLLQP GGLATTSVKS GQQWDAPNGW APLQWVAAEG LQNYGQDDVA
MEVTWRFLTN VQHTYDREKK LVEKYDVSST GTGGGGGEYP LQDGFGWTNG VTLKMLDLIC
PQEKPCDSVP STRPASLSAT PTKTPSAATQ