Gene SeD_A1521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1521 
Symbol 
ID6875672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1470608 
End bp1470862 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content55% 
IMG OID642784673 
Producttransglycosylase-associated protein 
Protein accessionYP_002215343 
Protein GI198245435 
COG category[S] Function unknown 
COG ID[COG2261] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.663718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.989429 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATTA TCGCCTGGAT TGTTTTTGGT TTGATTGCCG GCGTTATCGC CAAATTGCTT 
ATGCCGGGGC GCGATGGCGG GGGATTTATC CTGACCTGTA TTCTCGGTAT TGTCGGGGCG 
GTCGTTGGCG GATGGCTGGC GACGATGTTT GGTATTGGCG GCAGTATCAG CGGCTTTAAT 
CTGCACAGTT TCCTGGTCGC CGTGGTGGGC GCGATTATGG TGCTGGTGAT TTTCCGCCTT 
CTGCGACGCG GCTAA
 
Protein sequence
MGIIAWIVFG LIAGVIAKLL MPGRDGGGFI LTCILGIVGA VVGGWLATMF GIGGSISGFN 
LHSFLVAVVG AIMVLVIFRL LRRG