| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1427 |
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| Symbol | |
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| ID | 6875498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 1393043 |
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| End bp | 1395460 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642784590 |
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| Product | side tail fiber protein |
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| Protein accession | YP_002215260 |
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| Protein GI | 198245531 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake
[COG5301] Phage-related tail fibre protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.214924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGTAC TTATTTCCGG CGTACTGAAA GATGGTACGG GAACGCCGGT ACAGAACTGC
ACCATTCAGC TGAAGGCCTG CCGGACCAGT ACGACGGTGG TCGTGAATAC GGTGGCATCA
GAAAATCCGG ATGACGCCGG GCGCTACAGC ATGGATGTGG AGCAGGGGCA GTACACTGTC
ACGCTCCTGG TGGACGGGTA TCCCCCGTCA CATGCCGGAG TTATTACGGT TTACGATGAT
TCAAAGCTGG GCACCCTGAA TGATTTTCTG GGGGCCATGA CGGAAGACGA CGTCCGCCCG
GAGGCGCTGC GGCGTTTTGA GGCGATGGTG GAAGAAGTTG CCCGCCAGGC ATCGGAGGCA
TCGCGGAATG CCACCGCCGC AGGGCAGGCA TCTGAACAGG CGCAGACATC AGCAGGTCAG
GCATCGGAAA GCGCCACGGC AGCAGTGAAT GCAGCCGGAG CGGCAGAAGC ATCAGCCACA
CAGGCAGCCT CATCCGCAGC ATCTGCGGAG AGCAGCGCAG GTACGGCGAC TACAAAAGCC
GGGAAGGCAT CAGCCAGCGC GGCGTCGGCT GACACAGCCA GAACGGCGGC AGCCGCATCG
GCAGCCGCAG CGAAAACATC TGAAGCGAAT GCAGATGCCT CCCGTACTGC CGCCGGAGAT
TCAGCTGCTG CCGCAGCCGC CAGCGCGACG GCGGCGCAGA TATCAGCAGA GCGCGCCGGA
GCATCCGAAA CCGCCGCGAA GACGTCAGAA ACGCAGGCGG CTTCCAGTGC CGGTGATGCA
GGTGCGTCAG CCACGTCGGA AAAGGCGGCA GCCGCATCGG CAGCCGCAGC GAAAACATCT
GAGACAAATG CAGCAACGTC AGCAAGTACA GCAGCGGCCA GCGCAACAGC CGCCTCGTCA
TCAGCATCGG AGGCATCCAC TCACGCCGCC GCATCTGATA CCAGCGCATC ACTGGCGGCG
CAAAGCAGTA CTGCTGCCGG AGCAGCAGCC ACCAGAGCAG AAGATGCCGC AAAACGGGCA
GAAGATATCG CGGACGTGAT TTCCCTGGAA GATGCCAGCC TGACGAAAAA AGGTATCGTT
AAGTTAAGCA GCGCCACGGA CAGTGACAGC GAAGCGCTGG CAGCCACGCC AAAGGCGGTA
AAAACCGTTA TGGGTGAGGT GCAGGCTAAA GCCCCGCTGG ACAGTCCGGC ACTGACTGGT
ACGCCAACAG CACCAACTCC GGAAACCACA GCTGCAGGTA TTGAAATTGC CACGGCAGCG
TTTGTGGCTG CGAAAGTAGC ACAGTTGGTT GGTTCTGCGC CGGAAACGCT GAAAGAACTG
GCTGACGCGC TGGGTAACGA TCCGAACTTT GCCACCACTG TACTGAATAA ACTAGCGGGC
AAGCAGCCGC TGGACGATAC ACTGACGGCG CTGTCAGGAA AAAGCGTTGA CGGTCTTATC
GAATACGTTG GTTTACGGGA AACCATAAAT CACGCCGCCG ATGCATTACT AAAATCACAG
AACGGTGGCG ATATTCCGGA AAAGCCGCTG TTTGTACAAA ATATCGGAGC GCTCCCTGCA
TCAGGTACGG CTGTTGCAGC GAACAGACTG GCATCACGCG GCGCGCTTCC GGCACTGACT
GGTACGACAA GAGGCAGCGA TAGTGGCCTG ATAATGGGCG AGGTTTACAA CAATGGCTAT
CCGACGCAAT ACGGAAATAT TTTACGTCTG ACCGGAACCG GTGATGGGGA AATCCTCATT
GTCTGGAGCG GGACAAACGG TGCGCCAGCG CCCGCATATA TTCGCAGCCA TCGAGATACC
GCCGATGCTG AGTGGTCCGA ATGGGCAATG CTTTACACCA CACTAAACCC ACCTCCGGAT
TCGCATCCAG TAGGGGCGGC GATTGCATGG CCATCTGATG CTACTCCGGC AGGTTACGCT
CTGATGCAGG GGCAGTCCTT CGATAAATCT GCTTACCCGT TACTGGCTAT AGCGTATCCG
TCCGGCGTTA TCCCTGACAT GAGAGGCTGG ACAATAAAGG GTAAGCCCAT CAGTGGACGT
GCCGTATTGT CGCAAGAAAT GGACGGCAAT AAATCGCACT CGCACACCGC GCGGGCGCAG
GATACTGACT TAGGGACAAA ATCTACCTCA TCCTTTGATT ACGGCACGAA ATCGACCAAT
ACCACGGGCA ATCATACTCA CCAGTTCGGC GGTTATATCA ATTCATACTG GGGAGATTCC
AATCACACCT CATTTCAGCC TGGAGGTGGT GCATGGACAC AGGCCGCTGG CGACCATGCA
CATACAGTTT ATATCGGAGG ACATGAGCAC ACCATGTATA TCGGTCCACA CGGACACGTC
GTTATTGTGG ACGCAGACGG TAATGCGGAA ACCACGGTTA AAAATATTGC ATTTAACTAC
ATAGTGAGGC TGGCATAA
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| Protein sequence | MPVLISGVLK DGTGTPVQNC TIQLKACRTS TTVVVNTVAS ENPDDAGRYS MDVEQGQYTV
TLLVDGYPPS HAGVITVYDD SKLGTLNDFL GAMTEDDVRP EALRRFEAMV EEVARQASEA
SRNATAAGQA SEQAQTSAGQ ASESATAAVN AAGAAEASAT QAASSAASAE SSAGTATTKA
GKASASAASA DTARTAAAAS AAAAKTSEAN ADASRTAAGD SAAAAAASAT AAQISAERAG
ASETAAKTSE TQAASSAGDA GASATSEKAA AASAAAAKTS ETNAATSAST AAASATAASS
SASEASTHAA ASDTSASLAA QSSTAAGAAA TRAEDAAKRA EDIADVISLE DASLTKKGIV
KLSSATDSDS EALAATPKAV KTVMGEVQAK APLDSPALTG TPTAPTPETT AAGIEIATAA
FVAAKVAQLV GSAPETLKEL ADALGNDPNF ATTVLNKLAG KQPLDDTLTA LSGKSVDGLI
EYVGLRETIN HAADALLKSQ NGGDIPEKPL FVQNIGALPA SGTAVAANRL ASRGALPALT
GTTRGSDSGL IMGEVYNNGY PTQYGNILRL TGTGDGEILI VWSGTNGAPA PAYIRSHRDT
ADAEWSEWAM LYTTLNPPPD SHPVGAAIAW PSDATPAGYA LMQGQSFDKS AYPLLAIAYP
SGVIPDMRGW TIKGKPISGR AVLSQEMDGN KSHSHTARAQ DTDLGTKSTS SFDYGTKSTN
TTGNHTHQFG GYINSYWGDS NHTSFQPGGG AWTQAAGDHA HTVYIGGHEH TMYIGPHGHV
VIVDADGNAE TTVKNIAFNY IVRLA
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