Gene SeD_A1345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1345 
Symbol 
ID6871919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1320653 
End bp1321219 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content56% 
IMG OID642784513 
Producthypothetical protein 
Protein accessionYP_002215183 
Protein GI198243427 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.263242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.00089909 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGAAAC TCAACGCGAC CACAACCGCC CTGGTGGTTA TTGATTTACA GGAAGGAATT 
CTTCCGTTTG CCGGCGGCCC GTATACGGCA AATGAGGTGG TCGCCCGCGC CGCGCGGCTG
GCGGAAAAGT GTCGTGCCAA CGGCTCGCCC GTGGTTATGG TACGCGTTGG ATGGTCTGAT
GATTATGCCG AAGCGTTAAA ACAGCCGGTG GATGCCGCAA CGCCTGCGCA CGCGTTGCCG
GAAAACTGGT GGACCTGGCC TACGGCATTG GGTAAAAAGG ACAGCGATCT GGAAGTGACT
AAACGCCAGT GGGGCGCGTT TTACGGCACC GACCTGGAAT TACAACTTCG CCGCCGGGGT
ATCGACACCA TCATATTGTG CGGAATCTCA ACCAATATCG GCGTCGAATC CACAGCGCGT
AACGCCTGGG AGTTGGGATT TAACCTTATT ATTGCCGAAG ATGCCTGTAG CGCCGCCAGC
AGTGAGCAGC ATCAGAGCAG TATGACGCAT ATTTTCCCGC GCATTGGCCG GGTACGCAGC
GTAGAGGATA TTTTAAACGC CTTATGA
 
Protein sequence
MLKLNATTTA LVVIDLQEGI LPFAGGPYTA NEVVARAARL AEKCRANGSP VVMVRVGWSD 
DYAEALKQPV DAATPAHALP ENWWTWPTAL GKKDSDLEVT KRQWGAFYGT DLELQLRRRG
IDTIILCGIS TNIGVESTAR NAWELGFNLI IAEDACSAAS SEQHQSSMTH IFPRIGRVRS
VEDILNAL