| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1316 |
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| Symbol | otsA |
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| ID | 6875327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 1293700 |
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| End bp | 1295121 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642784484 |
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| Product | trehalose-6-phosphate synthase |
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| Protein accession | YP_002215154 |
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| Protein GI | 198246060 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.899957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 2.5238599999999998e-21 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCGTT TAGTCGTAGT ATCTAATCGA ATTGCCCCCC CGGATAATAA AGGCGGCGCC
GGCGGCCTCG CCGTTGGCGT GCTTGGCGCG CTAAAAGCGG CTGGCGGGTT GTGGTTCGGC
TGGAGTGGCG AGACAGGTAA CGAGGATGAG CCATTAAAAA AGGTGACAAA AGGTAATATT
ACCTGGGCAT CGTTTAACCT GAGCGAACAA GATTACGAAG ATTATTACTG TCAATTTTCC
AATGCGGTTC TCTGGCCTGC GTTCCACTAT CGTCTGGACT TGGTACAGTT TCAGCGTCCT
GCATGGGAAG GCTATATGCG GGTGAATGCG TTATTAGCGG ATAAGTTATT GCCCCTCATT
AAAGAGAACG ACATCATTTG GGTGCATGAC TACCACCTGT TACCGTTCGC CAGCGAGCTG
CGTAAACGCG GCGTGAACAA CCGAATTGGT TTTTTCCTGC ATATTCCATT CCCGACCCCG
GAGATTTTTA ACGCTTTACC GCCGCATGAT GAACTGCTGG AGCAGTTGTG TGACTTTGAT
CTGCTAGGGT TCCAGACCGA AAATGATCGC CTGGCTTTTC TGGATAGCCT TTCGAGTCAA
ACGCGAGTCA CGACTCGCAG CGGCAAGCAG CATATCGCGT GGGGTAAAGA CTTCCAGACA
GAAGTGTATC CCATCGGTAT TGAGCCCGAT GAGATTGCTC TGCAGGCTGC CGGGCCGTTG
CCGCCTAAAC TGGCGCAGCT CAAGGCGGAA CTGAAAAATG TGAAGAATAT TTTTTCCGTT
GAGCGGCTGG ATTATTCGAA AGGGCTGCCG GAACGTTTTC TGGCGTATGA AGCGCTACTG
GAAAACTACC CGCAGCATCG GGGAAAAATT CGTTATACCC AAATTGCGCC TACGTCACGC
GGCGAAGTAC AGGCATATCA GGATATTCGC CACCAGCTTG AGACGGAAGC AGGCCGGATT
AATGGGAAAT ATGGACAATT GGGCTGGACG CCGCTCTATT ATCTGAATCA GCATTTCGAC
CGTAAACTGT TAATGAAGAT ATTCCGTTAT TCAGACGTCG GGCTCGTCAC CCCGTTGCGT
GACGGGATGA ACCTGGTGGC GAAAGAGTTT GTCGCCGCGC AGGACCCCGC TAACCCTGGC
GTACTGGTAC TGTCACAGTT TGCCGGCGCG GCGAATGAAC TGACGTCGGC GTTAATCGTC
AATCCTTACG ATCGGGATGA CGTGGCGGCG GCGCTCAATC GTGCGCTAAC GATGCCCCTT
GCCGAGCGTA TTTCGCGTCA TGCGGAGATG CTGGACGTGA TCGTTAAAAA TGACATTAAC
CGCTGGCAGG AGCGTTTTAT TCATGACCTA AAGGAGGTCA CGCCGCGTAG CCCTGAGCGT
CAGCAGCAGA ACAACGTGGC GACGTTCCCT AAGCTGGCCT GA
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| Protein sequence | MSRLVVVSNR IAPPDNKGGA GGLAVGVLGA LKAAGGLWFG WSGETGNEDE PLKKVTKGNI
TWASFNLSEQ DYEDYYCQFS NAVLWPAFHY RLDLVQFQRP AWEGYMRVNA LLADKLLPLI
KENDIIWVHD YHLLPFASEL RKRGVNNRIG FFLHIPFPTP EIFNALPPHD ELLEQLCDFD
LLGFQTENDR LAFLDSLSSQ TRVTTRSGKQ HIAWGKDFQT EVYPIGIEPD EIALQAAGPL
PPKLAQLKAE LKNVKNIFSV ERLDYSKGLP ERFLAYEALL ENYPQHRGKI RYTQIAPTSR
GEVQAYQDIR HQLETEAGRI NGKYGQLGWT PLYYLNQHFD RKLLMKIFRY SDVGLVTPLR
DGMNLVAKEF VAAQDPANPG VLVLSQFAGA ANELTSALIV NPYDRDDVAA ALNRALTMPL
AERISRHAEM LDVIVKNDIN RWQERFIHDL KEVTPRSPER QQQNNVATFP KLA
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