Gene SeD_A1268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1268 
Symbol 
ID6872847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1256161 
End bp1257378 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content61% 
IMG OID642784439 
Productflagellar hook-length control protein 
Protein accessionYP_002215112 
Protein GI198243610 
COG category[N] Cell motility 
COG ID[COG3144] Flagellar hook-length control protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCC TGCCCCAACT GATCACCACC GATACCGACA TGACCGCGGG TCTGACGTCA 
GGAAAAACCA CCGGTTCAGC CGAGGACTTT CTGGCGCTCC TGGCGGGCGC GTTAGGCGCA 
GACGGCGCAC AGGGCAAAGA CGCCCGCATC ACGCTGGCCG ATTTACAGGC GGCAGGCGGC 
AAGTTATCGA AAGAGCTACT GACCCAACAT GGCGAGCCAG TCCAGGCGGT GAAGCTTGCC 
GACCTGCTGG CGCAAAAAGC GAATGCGACG GATGAAACGC TTACCGATCT GACACAAGCG 
CAGCATCTAC TGTCTACGCT AACGCCATCG TTGAAAACCA GCGCTCTGGC CGCACTGAGT 
AAGACGGCGC AGCATGATGA GAAAACGCCC GCGCTGAGCG ATGAGGATCT TGCCAGTCTG 
AGCGCCTTAT TCGCCATGCT GCCCGGACAA CCTGTCGCGA CGCCTGTCGC CGGAGAAACG 
CCGGCTGAAA ATCACATCGC CTTGCCGTCA CTGTTACGCG GCGACATGCC ATCGGCGCCG 
CAGGAAGAGA CACATACGCT CTCTTTTAGC GAGCATGAAA AAGGGAAAAC CGAGGCGTCG 
CTTGCGCGCG CCAGCGACGA TCGCGCCACG GGGCCAGCAC TGACGCCGCT GGTAGTCGCT 
GCCGCCGCGA CCAGCGCGAA AGTGGAGGTG GATAGCCCGC CCGCGCCAGT AACGCATGGC 
GCGGCAATGC CGACGCTCAG TAGCGCCACG GCGCAACCGC TACCTGTCGC CTCAGCCCCG 
GTACTCAGCG CGCCGTTAGG CAGCCATGAA TGGCAGCAAA CGTTCAGTCA GCAGGTCATG 
TTATTTACGC GTCAGGGACA GCAAAGCGCG CAGCTTCGAT TGCATCCGGA AGAGTTAGGT 
CAGGTGCATA TTTCGCTCAA GCTGGATGAC AATCAGGCGC AGCTCCAGAT GGTATCGCCG 
CACAGCCATG TCCGCGCCGC GCTGGAAGCC GCCCTGCCCA TGTTGCGCAC CCAGTTGGCG 
GAAAGCGGCA TTCAGTTGGG ACAAAGCAGT ATCAGTAGCG AAAGCTTTGC CGGACAGCAG 
CAGTCTTCGT CGCAACAACA GTCTTCCCGC GCCCAACACA CGGACGCGTT TGGCGCTGAA 
GATGACATAG CGTTAGCGGC GCCGGCCTCG CTTCAGGCCG CCGCGCGCGG CAATGGCGCA 
GTGGATATCT TCGCCTAA
 
Protein sequence
MITLPQLITT DTDMTAGLTS GKTTGSAEDF LALLAGALGA DGAQGKDARI TLADLQAAGG 
KLSKELLTQH GEPVQAVKLA DLLAQKANAT DETLTDLTQA QHLLSTLTPS LKTSALAALS 
KTAQHDEKTP ALSDEDLASL SALFAMLPGQ PVATPVAGET PAENHIALPS LLRGDMPSAP 
QEETHTLSFS EHEKGKTEAS LARASDDRAT GPALTPLVVA AAATSAKVEV DSPPAPVTHG 
AAMPTLSSAT AQPLPVASAP VLSAPLGSHE WQQTFSQQVM LFTRQGQQSA QLRLHPEELG 
QVHISLKLDD NQAQLQMVSP HSHVRAALEA ALPMLRTQLA ESGIQLGQSS ISSESFAGQQ 
QSSSQQQSSR AQHTDAFGAE DDIALAAPAS LQAAARGNGA VDIFA